Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:140891820-141531833

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32754 3 140909907 to 140917545 7638 - lincRNA gene predicted gene, 32754
Gm32875 3 140928605 to 140964731 36126 - lncRNA gene predicted gene, 32875
4930590L14Rik 3 140951835 to 140952676 841 + lincRNA gene RIKEN cDNA 4930590L14 gene
Tssr35912 3 140964432 to 140964476 44 - TSS region transcription start site region 35912
Pdha2 3 141210004 to 141212355 2351 - protein coding gene pyruvate dehydrogenase E1 alpha 2
Cpgi13883 3 141211149 to 141211980 831 CpG island CpG island 13883
Tssr1064 3 141211760 to 141211762 2 - TSS region transcription start site region 1064
Tssr35913 3 141211764 to 141211817 53 - TSS region transcription start site region 35913
Tssr35914 3 141211820 to 141211833 13 - TSS region transcription start site region 35914
Tssr35915 3 141211835 to 141211838 3 - TSS region transcription start site region 35915
Tssr32028 3 141211890 to 141211900 10 + TSS region transcription start site region 32028
Tssr32029 3 141214475 to 141214479 4 + TSS region transcription start site region 32029
Tssr32030 3 141449195 to 141449198 3 + TSS region transcription start site region 32030
Gm15688 3 141457976 to 141465333 7357 - antisense lncRNA gene predicted gene 15688
Tssr35916 3 141464575 to 141464578 3 - TSS region transcription start site region 35916
Cpgi13884 3 141464640 to 141466506 1866 CpG island CpG island 13884
Tssr1065 3 141464695 to 141464702 7 + TSS region transcription start site region 1065
Tssr32031 3 141465116 to 141465129 13 + TSS region transcription start site region 32031
Tssr32032 3 141465179 to 141465223 44 + TSS region transcription start site region 32032
Tssr1066 3 141465261 to 141465269 8 + TSS region transcription start site region 1066
Tssr32033 3 141465371 to 141465381 10 + TSS region transcription start site region 32033
Tssr32034 3 141465486 to 141465491 5 + TSS region transcription start site region 32034
Tssr32035 3 141465542 to 141465549 7 + TSS region transcription start site region 32035
Unc5c 3 141465564 to 141834924 369360 + protein coding gene unc-5 netrin receptor C
Tssr32036 3 141465567 to 141465570 3 + TSS region transcription start site region 32036
Tssr32037 3 141465592 to 141465611 19 + TSS region transcription start site region 32037
Tssr1067 3 141465654 to 141465664 10 + TSS region transcription start site region 1067
D3Mit368 3 141474487 to 141474636 149 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology-368
Tssr32038 3 141491534 to 141491538 4 + TSS region transcription start site region 32038
9430047L24Rik 3 141494061 to 141498747 4686 unclassified gene RIKEN cDNA 9430047L24 gene
Tssr1068 3 141495199 to 141495204 5 + TSS region transcription start site region 1068
Tssr32039 3 141510121 to 141510133 12 + TSS region transcription start site region 32039
Tssr32040 3 141527699 to 141527702 3 + TSS region transcription start site region 32040