Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:140499907-141327545

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm19080 3 140506718 to 140507267 549 - pseudogene predicted gene, 19080
Gm31211 3 140627180 to 140627432 252 - pseudogene predicted gene, 31211
Gm43049 3 140692038 to 140760704 68666 - lincRNA gene predicted gene 43049
D3Mit195.2 3 140784631 to 140784758 127 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 195.2
D3Mit195 3 140784763 to 140784899 136 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 195
Gm6214 3 140839097 to 140839637 540 - pseudogene predicted gene 6214
Gm43276 3 140871173 to 140871536 363 - pseudogene predicted gene 43276
Gm32754 3 140909907 to 140917545 7638 - lincRNA gene predicted gene, 32754
Gm32875 3 140928605 to 140964731 36126 - lncRNA gene predicted gene, 32875
4930590L14Rik 3 140951835 to 140952676 841 + lincRNA gene RIKEN cDNA 4930590L14 gene
Tssr35912 3 140964432 to 140964476 44 - TSS region transcription start site region 35912
Pdha2 3 141210004 to 141212355 2351 - protein coding gene pyruvate dehydrogenase E1 alpha 2
Cpgi13883 3 141211149 to 141211980 831 CpG island CpG island 13883
Tssr1064 3 141211760 to 141211762 2 - TSS region transcription start site region 1064
Tssr35913 3 141211764 to 141211817 53 - TSS region transcription start site region 35913
Tssr35914 3 141211820 to 141211833 13 - TSS region transcription start site region 35914
Tssr35915 3 141211835 to 141211838 3 - TSS region transcription start site region 35915
Tssr32028 3 141211890 to 141211900 10 + TSS region transcription start site region 32028
Tssr32029 3 141214475 to 141214479 4 + TSS region transcription start site region 32029