Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:138992757-139842863

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rap1gds1 3 138925902 to 139075201 149299 - protein coding gene RAP1, GTP-GDP dissociation stimulator 1
Tssr35903 3 139002282 to 139002303 21 - TSS region transcription start site region 35903
Tssr35904 3 139002368 to 139002379 11 - TSS region transcription start site region 35904
Tssr35905 3 139019611 to 139019613 2 - TSS region transcription start site region 35905
E030024I16Rik 3 139041455 to 139046187 4732 unclassified gene RIKEN cDNA E030024I16 gene
Cpgi13881 3 139074403 to 139076198 1795 CpG island CpG island 13881
Tssr35906 3 139075098 to 139075109 11 - TSS region transcription start site region 35906
Tssr35907 3 139075116 to 139075132 16 - TSS region transcription start site region 35907
Tssr35908 3 139075133 to 139075173 40 - TSS region transcription start site region 35908
Tssr35909 3 139075178 to 139075253 75 - TSS region transcription start site region 35909
Tssr35910 3 139075309 to 139075319 10 - TSS region transcription start site region 35910
Tssr32022 3 139075497 to 139075507 10 + TSS region transcription start site region 32022
Gm4862 3 139128334 to 139128771 437 - pseudogene predicted gene 4862
D3Jcs16 3 139173333 to 139173635 302 DNA segment DNA segment, Chr 3, John C. Schimenti 16
Cpgi13882 3 139205372 to 139206062 690 CpG island CpG island 13882
Tssr32023 3 139205644 to 139205655 11 + TSS region transcription start site region 32023
Tssr32024 3 139205658 to 139205684 26 + TSS region transcription start site region 32024
Stpg2 3 139205694 to 139710299 504605 + protein coding gene sperm tail PG rich repeat containing 2
Tssr32025 3 139205887 to 139205909 22 + TSS region transcription start site region 32025
Tssr32026 3 139205920 to 139205936 16 + TSS region transcription start site region 32026
Tssr1063 3 139274118 to 139274120 2 + TSS region transcription start site region 1063
Gm43163 3 139411795 to 139412236 441 + pseudogene predicted gene 43163
Gm24260 3 139417757 to 139417863 106 - snRNA gene predicted gene, 24260
D3Mit351 3 139599455 to 139599553 98 DNA segment DNA Segment, Chr 3 Massachusetts Institute of Technology 351
Gm2451 3 139649379 to 139650377 998 + pseudogene predicted pseudogene 2451
Gm32693 3 139777153 to 139780759 3606 - lincRNA gene predicted gene, 32693
Gm43678 3 139812111 to 139812764 653 - lincRNA gene predicted gene 43678