Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:138787779-139177785

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tspan5 3 138742208 to 138904433 162225 + protein coding gene tetraspanin 5
Tssr32011 3 138793340 to 138793362 22 + TSS region transcription start site region 32011
Tssr32012 3 138804521 to 138804530 9 + TSS region transcription start site region 32012
Tssr32013 3 138813518 to 138813543 25 + TSS region transcription start site region 32013
Gm16060 3 138828685 to 138829162 477 - pseudogene predicted pseudogene 16060
Tssr32014 3 138860489 to 138860506 17 + TSS region transcription start site region 32014
Tssr1062 3 138860517 to 138860527 10 + TSS region transcription start site region 1062
Tssr32015 3 138877337 to 138877345 8 + TSS region transcription start site region 32015
Tssr32016 3 138902474 to 138902485 11 + TSS region transcription start site region 32016
Tssr32017 3 138903001 to 138903012 11 + TSS region transcription start site region 32017
Tssr32018 3 138903094 to 138903114 20 + TSS region transcription start site region 32018
Tssr32019 3 138903149 to 138903164 15 + TSS region transcription start site region 32019
Tssr32020 3 138903175 to 138903187 12 + TSS region transcription start site region 32020
Tssr32021 3 138903260 to 138903265 5 + TSS region transcription start site region 32021
Cpgi13880 3 138903936 to 138904212 276 CpG island CpG island 13880
Rap1gds1 3 138925902 to 139075201 149299 - protein coding gene RAP1, GTP-GDP dissociation stimulator 1
Gm18381 3 138936459 to 138939026 2567 - pseudogene predicted gene, 18381
Tssr35901 3 138975381 to 138975393 12 - TSS region transcription start site region 35901
Gm43162 3 138976312 to 138978081 1769 - unclassified gene predicted gene 43162
Tssr35902 3 138982779 to 138982785 6 - TSS region transcription start site region 35902
Tssr35903 3 139002282 to 139002303 21 - TSS region transcription start site region 35903
Tssr35904 3 139002368 to 139002379 11 - TSS region transcription start site region 35904
Tssr35905 3 139019611 to 139019613 2 - TSS region transcription start site region 35905
E030024I16Rik 3 139041455 to 139046187 4732 unclassified gene RIKEN cDNA E030024I16 gene
Cpgi13881 3 139074403 to 139076198 1795 CpG island CpG island 13881
Tssr35906 3 139075098 to 139075109 11 - TSS region transcription start site region 35906
Tssr35907 3 139075116 to 139075132 16 - TSS region transcription start site region 35907
Tssr35908 3 139075133 to 139075173 40 - TSS region transcription start site region 35908
Tssr35909 3 139075178 to 139075253 75 - TSS region transcription start site region 35909
Tssr35910 3 139075309 to 139075319 10 - TSS region transcription start site region 35910
Tssr32022 3 139075497 to 139075507 10 + TSS region transcription start site region 32022
Gm4862 3 139128334 to 139128771 437 - pseudogene predicted gene 4862
D3Jcs16 3 139173333 to 139173635 302 DNA segment DNA segment, Chr 3, John C. Schimenti 16