Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:138340460-138490468

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adh6b 3 138341775 to 138358861 17086 + protein coding gene alcohol dehydrogenase 6B (class V)
Tssr31975 3 138341933 to 138341938 5 + TSS region transcription start site region 31975
Tssr31976 3 138341947 to 138341961 14 + TSS region transcription start site region 31976
Tssr31977 3 138341968 to 138341981 13 + TSS region transcription start site region 31977
Tssr31978 3 138342284 to 138342300 16 + TSS region transcription start site region 31978
Tssr31979 3 138342792 to 138342811 19 + TSS region transcription start site region 31979
Gm23467 3 138343138 to 138343296 158 + snRNA gene predicted gene, 23467
Adh6-ps1 3 138374121 to 138388291 14170 + pseudogene alcohol dehydrogenase 6 (class V), pseudogene 1
Tssr31980 3 138374146 to 138374163 17 + TSS region transcription start site region 31980
Tssr31981 3 138415460 to 138415468 8 + TSS region transcription start site region 31981
Tssr31982 3 138415484 to 138415510 26 + TSS region transcription start site region 31982
Adh4 3 138415497 to 138430892 15395 + protein coding gene alcohol dehydrogenase 4 (class II), pi polypeptide
Tssr31983 3 138432457 to 138432460 3 + TSS region transcription start site region 31983
Cpgi13874 3 138442543 to 138443606 1063 CpG island CpG island 13874
Tssr31984 3 138443085 to 138443176 91 + TSS region transcription start site region 31984
Adh5 3 138443093 to 138455499 12406 + protein coding gene alcohol dehydrogenase 5 (class III), chi polypeptide
Tssr31985 3 138451455 to 138451468 13 + TSS region transcription start site region 31985
Metap1 3 138458960 to 138489382 30422 - protein coding gene methionyl aminopeptidase 1
Tssr35892 3 138460249 to 138460254 5 - TSS region transcription start site region 35892
Tssr35893 3 138472251 to 138472277 26 - TSS region transcription start site region 35893
Gm32553 3 138484410 to 138487463 3053 - lncRNA gene predicted gene, 32553
Cpgi13875 3 138488810 to 138489848 1038 CpG island CpG island 13875
Tssr31986 3 138488869 to 138488881 12 + TSS region transcription start site region 31986
Tssr31987 3 138488891 to 138488902 11 + TSS region transcription start site region 31987
Tssr35894 3 138489037 to 138489044 7 - TSS region transcription start site region 35894
Tssr35895 3 138489372 to 138489411 39 - TSS region transcription start site region 35895
Tssr31988 3 138489773 to 138489785 12 + TSS region transcription start site region 31988