Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:138157838-138277847

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trmt10a 3 138143517 to 138159821 16304 + protein coding gene tRNA methyltransferase 10A
4930579F01Rik 3 138164078 to 138193825 29747 - protein coding gene RIKEN cDNA 4930579F01 gene
Cpgi13872 3 138186040 to 138186472 432 CpG island CpG island 13872
Tssr35883 3 138186700 to 138186732 32 - TSS region transcription start site region 35883
Tssr35884 3 138186741 to 138186748 7 - TSS region transcription start site region 35884
Tssr35885 3 138193824 to 138193851 27 - TSS region transcription start site region 35885
0610031O16Rik 3 138210717 to 138239663 28946 - antisense lncRNA gene RIKEN cDNA 0610031O16 gene
D3Ertd425e 3 138212167 to 138212373 206 DNA segment DNA segment, Chr 3, ERATO Doi 425, expressed
Adh7 3 138217760 to 138233382 15622 + protein coding gene alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
Tssr31950 3 138217762 to 138217777 15 + TSS region transcription start site region 31950
Tssr31951 3 138217789 to 138217803 14 + TSS region transcription start site region 31951
Tssr31952 3 138217814 to 138217828 14 + TSS region transcription start site region 31952
Tssr31953 3 138217838 to 138217847 9 + TSS region transcription start site region 31953
Tssr35886 3 138239583 to 138239605 22 - TSS region transcription start site region 35886
Tssr35887 3 138239627 to 138239645 18 - TSS region transcription start site region 35887
Tssr35888 3 138239658 to 138239665 7 - TSS region transcription start site region 35888
Tssr35889 3 138239670 to 138239685 15 - TSS region transcription start site region 35889
Gm40156 3 138261047 to 138274981 13934 + lncRNA gene predicted gene, 40156
Tssr31954 3 138277489 to 138277495 6 + TSS region transcription start site region 31954
Tssr31955 3 138277642 to 138277659 17 + TSS region transcription start site region 31955
Adh1 3 138277645 to 138290691 13046 + protein coding gene alcohol dehydrogenase 1 (class I)
Tssr31956 3 138277748 to 138277757 9 + TSS region transcription start site region 31956
Tssr31957 3 138277765 to 138277777 12 + TSS region transcription start site region 31957