Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:138004855-138228461

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm19708 3 138000939 to 138016044 15105 + lincRNA gene predicted gene, 19708
Gm5105 3 138048761 to 138067388 18627 - protein coding gene predicted gene 5105
Tssr31936 3 138061915 to 138061920 5 + TSS region transcription start site region 31936
1110002E22Rik 3 138065052 to 138081506 16454 + protein coding gene RIKEN cDNA 1110002E22 gene
Tssr31937 3 138065057 to 138065078 21 + TSS region transcription start site region 31937
Tssr31938 3 138065143 to 138065156 13 + TSS region transcription start site region 31938
Tssr31939 3 138065169 to 138065197 28 + TSS region transcription start site region 31939
Alpq6 3 138066317 to 138066317 0 QTL alcohol preference QTL 6
Tssr31940 3 138066625 to 138066648 23 + TSS region transcription start site region 31940
Tssr31941 3 138066685 to 138066704 19 + TSS region transcription start site region 31941
Mttp 3 138089855 to 138143461 53606 - protein coding gene microsomal triglyceride transfer protein
Tssr35872 3 138090230 to 138090243 13 - TSS region transcription start site region 35872
Tssr35873 3 138090324 to 138090333 9 - TSS region transcription start site region 35873
Tssr35874 3 138091039 to 138091070 31 - TSS region transcription start site region 35874
Tssr35875 3 138091131 to 138091155 24 - TSS region transcription start site region 35875
Gm43691 3 138103916 to 138114717 10801 + antisense lncRNA gene predicted gene 43691
Tssr31942 3 138107239 to 138107273 34 + TSS region transcription start site region 31942
Tssr31943 3 138109064 to 138109092 28 + TSS region transcription start site region 31943
Tssr1060 3 138112469 to 138112471 2 + TSS region transcription start site region 1060
Tssr35876 3 138114140 to 138114159 19 - TSS region transcription start site region 35876
Tssr35877 3 138131332 to 138131355 23 - TSS region transcription start site region 35877
Tssr35878 3 138131356 to 138131381 25 - TSS region transcription start site region 35878
Tssr35879 3 138131389 to 138131400 11 - TSS region transcription start site region 35879
Cpgi13871 3 138143263 to 138144189 926 CpG island CpG island 13871
Tssr35880 3 138143352 to 138143396 44 - TSS region transcription start site region 35880
Tssr31944 3 138143429 to 138143477 48 + TSS region transcription start site region 31944
Tssr31945 3 138143483 to 138143496 13 + TSS region transcription start site region 31945
Trmt10a 3 138143517 to 138159821 16304 + protein coding gene tRNA methyltransferase 10A
Tssr35881 3 138143688 to 138143713 25 - TSS region transcription start site region 35881
Tssr35882 3 138143717 to 138143732 15 - TSS region transcription start site region 35882
Tssr31946 3 138143822 to 138143843 21 + TSS region transcription start site region 31946
Tssr31947 3 138143846 to 138143886 40 + TSS region transcription start site region 31947
Tssr31948 3 138143888 to 138143919 31 + TSS region transcription start site region 31948
Tssr31949 3 138143922 to 138143937 15 + TSS region transcription start site region 31949
4930579F01Rik 3 138164078 to 138193825 29747 - protein coding gene RIKEN cDNA 4930579F01 gene
Cpgi13872 3 138186040 to 138186472 432 CpG island CpG island 13872
Tssr35883 3 138186700 to 138186732 32 - TSS region transcription start site region 35883
Tssr35884 3 138186741 to 138186748 7 - TSS region transcription start site region 35884
Tssr35885 3 138193824 to 138193851 27 - TSS region transcription start site region 35885
0610031O16Rik 3 138210717 to 138239663 28946 - antisense lncRNA gene RIKEN cDNA 0610031O16 gene
D3Ertd425e 3 138212167 to 138212373 206 DNA segment DNA segment, Chr 3, ERATO Doi 425, expressed
Adh7 3 138217760 to 138233382 15622 + protein coding gene alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
Tssr31950 3 138217762 to 138217777 15 + TSS region transcription start site region 31950
Tssr31951 3 138217789 to 138217803 14 + TSS region transcription start site region 31951
Tssr31952 3 138217814 to 138217828 14 + TSS region transcription start site region 31952
Tssr31953 3 138217838 to 138217847 9 + TSS region transcription start site region 31953