Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:137315045-137787622

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr35852 3 137336127 to 137336130 3 - TSS region transcription start site region 35852
Tssr31897 3 137341032 to 137341046 14 + TSS region transcription start site region 31897
Emcn 3 137341061 to 137431069 90008 + protein coding gene endomucin
Tssr31898 3 137341076 to 137341095 19 + TSS region transcription start site region 31898
Tssr31899 3 137341103 to 137341146 43 + TSS region transcription start site region 31899
Tssr31900 3 137341147 to 137341154 7 + TSS region transcription start site region 31900
Tssr31901 3 137341179 to 137341190 11 + TSS region transcription start site region 31901
Tssr31902 3 137341212 to 137341223 11 + TSS region transcription start site region 31902
Gm38650 3 137349361 to 137369628 20267 - lncRNA gene predicted gene, 38650
D3Mit349 3 137546613 to 137546724 111 DNA segment DNA Segment, Chr 3 Massachusetts Institute of Technology 349
Gm4861 3 137550045 to 137552622 2577 - lincRNA gene predicted gene 4861
Tssr35853 3 137552657 to 137552665 8 - TSS region transcription start site region 35853
Tssr35854 3 137564383 to 137564425 42 - TSS region transcription start site region 35854
Gm22468 3 137621474 to 137621593 119 + miRNA gene predicted gene, 22468
Cpgi13864 3 137623520 to 137624347 827 CpG island CpG island 13864
Ddit4l 3 137623672 to 137628332 4660 + protein coding gene DNA-damage-inducible transcript 4-like
Tssr31903 3 137623716 to 137623727 11 + TSS region transcription start site region 31903
Tssr31904 3 137623728 to 137623756 28 + TSS region transcription start site region 31904
Tssr31905 3 137623769 to 137623789 20 + TSS region transcription start site region 31905
Tssr31906 3 137624031 to 137624062 31 + TSS region transcription start site region 31906
Tssr31907 3 137624203 to 137624210 7 + TSS region transcription start site region 31907
Tssr31908 3 137626630 to 137626636 6 + TSS region transcription start site region 31908
Gm30946 3 137644058 to 137644781 723 - pseudogene predicted gene, 30946
D3Mit193 3 137657629 to 137657778 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 193
Gm21962 3 137671524 to 137672540 1016 + protein coding gene predicted gene, 21962
Gm42610 3 137690987 to 137699128 8141 + lincRNA gene predicted gene 42610
Gm25080 3 137715658 to 137715764 106 + snRNA gene predicted gene, 25080
D3Mit350 3 137747149 to 137747247 98 DNA segment DNA Segment, Chr 3 Massachusetts Institute of Technology 350
Ctrq2 3 137747247 to 89232660 -48514587 QTL C. trachomatis resistance QTL 2
Cpgi13865 3 137752972 to 137753129 157 CpG island CpG island 13865
Tssr31909 3 137780409 to 137780450 41 + TSS region transcription start site region 31909
Mir6380 3 137783535 to 137783615 80 - miRNA gene microRNA 6380