Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:136681004-137001138

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
am3 3 125522368 to 136996870 11474502 heritable phenotypic marker absence of third molars
Ppp3ca 3 136670124 to 136937727 267603 + protein coding gene protein phosphatase 3, catalytic subunit, alpha isoform
Tssr35850 3 136684652 to 136684667 15 - TSS region transcription start site region 35850
Tssr31878 3 136684886 to 136684901 15 + TSS region transcription start site region 31878
Tssr31879 3 136692259 to 136692272 13 + TSS region transcription start site region 31879
Tssr31880 3 136692323 to 136692333 10 + TSS region transcription start site region 31880
Tssr31881 3 136696826 to 136696833 7 + TSS region transcription start site region 31881
Gm42822 3 136701211 to 136702739 1528 + unclassified gene predicted gene 42822
Tssr31882 3 136702763 to 136702767 4 + TSS region transcription start site region 31882
Tssr31883 3 136713701 to 136713714 13 + TSS region transcription start site region 31883
Tssr31884 3 136722295 to 136722301 6 + TSS region transcription start site region 31884
Tssr31885 3 136755053 to 136755058 5 + TSS region transcription start site region 31885
4930599N24Rik 3 136758958 to 136759960 1002 - unclassified gene RIKEN cDNA 4930599N24 gene
Tssr31886 3 136775718 to 136775721 3 + TSS region transcription start site region 31886
Gm44327 3 136798262 to 136798378 116 - miRNA gene predicted gene, 44327
Tssr31887 3 136805300 to 136805318 18 + TSS region transcription start site region 31887
D3Mit146 3 136841004 to 136841138 134 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 146
Cpgi13863 3 136902883 to 136903160 277 CpG island CpG island 13863
Tssr31888 3 136903018 to 136903024 6 + TSS region transcription start site region 31888
Tssr31889 3 136903027 to 136903069 42 + TSS region transcription start site region 31889
Tssr31890 3 136903075 to 136903089 14 + TSS region transcription start site region 31890
Tssr31891 3 136935250 to 136935261 11 + TSS region transcription start site region 31891
Tssr31892 3 136935517 to 136935544 27 + TSS region transcription start site region 31892
Tssr31893 3 136935571 to 136935591 20 + TSS region transcription start site region 31893
Tssr31894 3 136935694 to 136935741 47 + TSS region transcription start site region 31894
Tssr35851 3 136935774 to 136935782 8 - TSS region transcription start site region 35851
1700006H20Rik 3 136942557 to 136955087 12530 - lncRNA gene RIKEN cDNA 1700006H20 gene
Gm43357 3 136943237 to 136946544 3307 - lincRNA gene predicted gene 43357
Gm9409 3 136948605 to 136948920 315 + pseudogene predicted gene 9409
Gm43356 3 136952790 to 136955093 2303 - lincRNA gene predicted gene 43356
Tssr31895 3 136955274 to 136955284 10 + TSS region transcription start site region 31895
D3Mit125 3 136996728 to 136996870 142 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 125