Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:136106919-136637024

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bank1 3 136053363 to 136326066 272703 - protein coding gene B cell scaffold protein with ankyrin repeats 1
Tssr35842 3 136167164 to 136167168 4 - TSS region transcription start site region 35842
Tssr35843 3 136325928 to 136325947 19 - TSS region transcription start site region 35843
Tssr35844 3 136325953 to 136325961 8 - TSS region transcription start site region 35844
Tssr35845 3 136325962 to 136326034 72 - TSS region transcription start site region 35845
Tssr35846 3 136326038 to 136326060 22 - TSS region transcription start site region 35846
Gm9408 3 136331486 to 136332990 1504 + pseudogene predicted gene 9408
Gm43402 3 136346204 to 136346362 158 + pseudogene predicted gene 43402
Afpq8 3 136351571 to 136351695 124 QTL abdominal fat percent QTL 8
D3Mit256 3 136351571 to 136351695 124 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 256
Ses9 3 136351571 to 136351695 124 QTL salmonella enteritidis susceptibility 9
Sum2 3 136371919 to 147891026 11519107 heritable phenotypic marker suppressor of methyl CpG binding protein 2, 2
D3Mit291 3 136371919 to 136372024 105 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 291
1700030L20Rik 3 136435270 to 136449349 14079 - lincRNA gene RIKEN cDNA 1700030L20 gene
Tssr35847 3 136449442 to 136449451 9 - TSS region transcription start site region 35847
Tssr35848 3 136449481 to 136449485 4 - TSS region transcription start site region 35848
D3Mit255 3 136578385 to 136578517 132 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 255
Tgq15 3 136612825 to 136612825 0 QTL triglyceride QTL 15
Tgq14 3 136612825 to 136612825 0 QTL triglyceride QTL 14