MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:136085962-136566034

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Bank1	3	136053363 to 136326066	272703	-	protein coding gene	B cell scaffold protein with ankyrin repeats 1
Tssr35841	3	136103521 to 136103526	5	-	TSS region	transcription start site region 35841
Tssr35842	3	136167164 to 136167168	4	-	TSS region	transcription start site region 35842
Tssr35843	3	136325928 to 136325947	19	-	TSS region	transcription start site region 35843
Tssr35844	3	136325953 to 136325961	8	-	TSS region	transcription start site region 35844
Tssr35845	3	136325962 to 136326034	72	-	TSS region	transcription start site region 35845
Tssr35846	3	136326038 to 136326060	22	-	TSS region	transcription start site region 35846
Gm9408	3	136331486 to 136332990	1504	+	pseudogene	predicted gene 9408
Gm43402	3	136346204 to 136346362	158	+	pseudogene	predicted gene 43402
Afpq8	3	136351571 to 136351695	124		QTL	abdominal fat percent QTL 8
D3Mit256	3	136351571 to 136351695	124		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 256
Ses9	3	136351571 to 136351695	124		QTL	salmonella enteritidis susceptibility 9
Sum2	3	136371919 to 147891026	11519107		heritable phenotypic marker	suppressor of methyl CpG binding protein 2, 2
D3Mit291	3	136371919 to 136372024	105		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 291
1700030L20Rik	3	136435270 to 136449349	14079	-	lincRNA gene	RIKEN cDNA 1700030L20 gene
Tssr35847	3	136449442 to 136449451	9	-	TSS region	transcription start site region 35847
Tssr35848	3	136449481 to 136449485	4	-	TSS region	transcription start site region 35848