Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:135446527-135646538

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ube2d3	3	135438237 to 135467178	28941	+	protein coding gene	ubiquitin-conjugating enzyme E2D 3
Tssr31825	3	135455928 to 135455932	4	+	TSS region	transcription start site region 31825
Tssr31826	3	135462592 to 135462606	14	+	TSS region	transcription start site region 31826
Tssr31827	3	135462959 to 135463008	49	+	TSS region	transcription start site region 31827
Gm30992	3	135471697 to 135485516	13819	-	lncRNA gene	predicted gene, 30992
Gm42807	3	135483632 to 135483960	328	+	pseudogene	predicted gene 42807
Cpgi13856	3	135485227 to 135485943	716		CpG island	CpG island 13856
Tssr31828	3	135485605 to 135485668	63	+	TSS region	transcription start site region 31828
Manba	3	135485611 to 135571404	85793	+	protein coding gene	mannosidase, beta A, lysosomal
Gm16100	3	135495653 to 135495883	230	+	pseudogene	predicted gene 16100
Tssr31829	3	135511864 to 135511873	9	+	TSS region	transcription start site region 31829
Tssr31830	3	135522912 to 135522938	26	+	TSS region	transcription start site region 31830
Oaz2-ps	3	135525964 to 135526532	568	-	pseudogene	ornithine decarboxylase antizyme 2, pseudogene
Tssr35786	3	135543242 to 135543257	15	-	TSS region	transcription start site region 35786
Tssr31831	3	135544691 to 135544705	14	+	TSS region	transcription start site region 31831
Tssr35787	3	135546527 to 135546538	11	-	TSS region	transcription start site region 35787
Tssr31832	3	135547585 to 135547598	13	+	TSS region	transcription start site region 31832
Tssr31833	3	135548549 to 135548562	13	+	TSS region	transcription start site region 31833
Tssr31834	3	135548578 to 135548592	14	+	TSS region	transcription start site region 31834
Tssr31835	3	135548603 to 135548626	23	+	TSS region	transcription start site region 31835
Tssr35788	3	135550459 to 135550470	11	-	TSS region	transcription start site region 35788
Tssr31836	3	135553160 to 135553168	8	+	TSS region	transcription start site region 31836
Tssr31837	3	135571717 to 135571747	30	+	TSS region	transcription start site region 31837
Tssr31838	3	135584655 to 135584659	4	+	TSS region	transcription start site region 31838
Nfkb1	3	135584655 to 135691547	106892	-	protein coding gene	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
Tssr35789	3	135587988 to 135588011	23	-	TSS region	transcription start site region 35789
Tssr35790	3	135588314 to 135588322	8	-	TSS region	transcription start site region 35790
Tssr35791	3	135589972 to 135590014	42	-	TSS region	transcription start site region 35791
Tssr35792	3	135590577 to 135590605	28	-	TSS region	transcription start site region 35792
Tssr35793	3	135590621 to 135590632	11	-	TSS region	transcription start site region 35793
Tssr35794	3	135594361 to 135594400	39	-	TSS region	transcription start site region 35794
Tssr35795	3	135594406 to 135594425	19	-	TSS region	transcription start site region 35795
Tssr35796	3	135598999 to 135599018	19	-	TSS region	transcription start site region 35796
Tssr31839	3	135603028 to 135603068	40	+	TSS region	transcription start site region 31839
Tssr31840	3	135607385 to 135607395	10	+	TSS region	transcription start site region 31840
Cpgi13857	3	135608070 to 135608488	418		CpG island	CpG island 13857
Tssr35797	3	135608221 to 135608290	69	-	TSS region	transcription start site region 35797
Tssr35798	3	135608361 to 135608379	18	-	TSS region	transcription start site region 35798
Tssr35799	3	135608401 to 135608412	11	-	TSS region	transcription start site region 35799
Gm46827	3	135611586 to 135612839	1253	+	lncRNA gene	predicted gene, 46827
Tssr35800	3	135613677 to 135613681	4	-	TSS region	transcription start site region 35800