Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:133684339-134834355

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr35771 3 133749530 to 133749541 11 - TSS region transcription start site region 35771
Gm6135 3 133789515 to 133791504 1989 - lincRNA gene prediticted gene 6135
Tssr35772 3 133791493 to 133791502 9 - TSS region transcription start site region 35772
Tssr35773 3 133791515 to 133791523 8 - TSS region transcription start site region 35773
Gm30484 3 133815919 to 133818518 2599 - lincRNA gene predicted gene, 30484
Gm26691 3 133830621 to 134149286 318665 - antisense lncRNA gene predicted gene, 26691
Gm44361 3 134147015 to 134147108 93 - miRNA gene predicted gene, 44361
Gm43192 3 134160365 to 134191976 31611 + lincRNA gene predicted gene 43192
Gm43193 3 134180911 to 134181351 440 + pseudogene predicted gene 43193
Tssr31784 3 134200064 to 134200090 26 + TSS region transcription start site region 31784
Tssr31785 3 134200142 to 134200152 10 + TSS region transcription start site region 31785
Gm30648 3 134207906 to 134213234 5328 + lincRNA gene predicted gene, 30648
Cpgi13850 3 134235926 to 134236639 713 CpG island CpG island 13850
Tssr31786 3 134236331 to 134236373 42 + TSS region transcription start site region 31786
Cxxc4 3 134236415 to 134262090 25675 + protein coding gene CXXC finger 4
Tssr31787 3 134236483 to 134236500 17 + TSS region transcription start site region 31787
Tssr31788 3 134236533 to 134236542 9 + TSS region transcription start site region 31788
Tssr31789 3 134236585 to 134236594 9 + TSS region transcription start site region 31789
Cpgi13851 3 134239205 to 134240816 1611 CpG island CpG island 13851
Tssr31790 3 134239254 to 134239279 25 + TSS region transcription start site region 31790
Tssr31791 3 134239286 to 134239307 21 + TSS region transcription start site region 31791
Mir1895 3 134240505 to 134240583 78 - miRNA gene microRNA 1895
Tssr35774 3 134249451 to 134249452 1 - TSS region transcription start site region 35774
Tssr31792 3 134259339 to 134259355 16 + TSS region transcription start site region 31792
Gm43559 3 134272045 to 134272510 465 - pseudogene predicted gene 43559
Gm43558 3 134357292 to 134357501 209 + unclassified gene predicted gene 43558
Gm6077 3 134365606 to 134366104 498 - pseudogene predicted gene 6077
4930539C22Rik 3 134404143 to 134423635 19492 - lincRNA gene RIKEN cDNA 4930539C22 gene
Gm26820 3 134462087 to 134630765 168678 - lincRNA gene predicted gene, 26820
Cpgi13852 3 134828903 to 134829753 850 CpG island CpG island 13852
Tssr31793 3 134828993 to 134829015 22 + TSS region transcription start site region 31793
Tacr3 3 134829007 to 134934579 105572 + protein coding gene tachykinin receptor 3