Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:132731745-133100291

49 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tbck	3	132684144 to 132841688	157544	+	protein coding gene	TBC1 domain containing kinase
Tssr31759	3	132737419 to 132737426	7	+	TSS region	transcription start site region 31759
Tssr31760	3	132743645 to 132743648	3	+	TSS region	transcription start site region 31760
Tssr31761	3	132766571 to 132766574	3	+	TSS region	transcription start site region 31761
Gm42872	3	132767407 to 132769373	1966	+	unclassified gene	predicted gene 42872
Gm30294	3	132772128 to 132782870	10742	-	lncRNA gene	predicted gene, 30294
Gm22322	3	132787225 to 132787335	110	-	snoRNA gene	predicted gene, 22322
Tssr35734	3	132791229 to 132791235	6	-	TSS region	transcription start site region 35734
Gm42876	3	132806253 to 132809467	3214	+	unclassified gene	predicted gene 42876
Tssr31762	3	132814988 to 132814999	11	+	TSS region	transcription start site region 31762
Tssr31763	3	132818062 to 132818067	5	+	TSS region	transcription start site region 31763
Gm29811	3	132842202 to 132878596	36394	-	lincRNA gene	predicted gene, 29811
Gm9403	3	132842396 to 132844576	2180	+	pseudogene	predicted gene 9403
Tssr31764	3	132843096 to 132843129	33	+	TSS region	transcription start site region 31764
Tssr35735	3	132857450 to 132857457	7	-	TSS region	transcription start site region 35735
Tssr31765	3	132865847 to 132865897	50	+	TSS region	transcription start site region 31765
Npnt	3	132881745 to 132950291	68546	-	protein coding gene	nephronectin
Tssr35736	3	132883382 to 132883392	10	-	TSS region	transcription start site region 35736
Cpgi13844	3	132885715 to 132885960	245		CpG island	CpG island 13844
Tssr31766	3	132904814 to 132904866	52	+	TSS region	transcription start site region 31766
Tssr35737	3	132904865 to 132904983	118	-	TSS region	transcription start site region 35737
Tssr35738	3	132906754 to 132906765	11	-	TSS region	transcription start site region 35738
Cpgi13845	3	132929288 to 132929514	226		CpG island	CpG island 13845
Gm23196	3	132939870 to 132939976	106	+	snRNA gene	predicted gene, 23196
D3Mit15	3	132940762 to 132940908	146		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 15
Tssr35739	3	132948426 to 132948453	27	-	TSS region	transcription start site region 35739
Cpgi13846	3	132949282 to 132950876	1594		CpG island	CpG island 13846
Tssr31767	3	132949416 to 132949417	1	+	TSS region	transcription start site region 31767
Tssr35740	3	132950167 to 132950181	14	-	TSS region	transcription start site region 35740
Tssr35741	3	132950189 to 132950198	9	-	TSS region	transcription start site region 35741
Tssr35742	3	132950223 to 132950226	3	-	TSS region	transcription start site region 35742
Tssr35743	3	132977207 to 132977211	4	-	TSS region	transcription start site region 35743
Gstcd	3	132982550 to 133091833	109283	-	protein coding gene	glutathione S-transferase, C-terminal domain containing
Gm19148	3	133029423 to 133029851	428	+	pseudogene	predicted gene, 19148
Gm42874	3	133050622 to 133052395	1773	-	unclassified gene	predicted gene 42874
Gm42873	3	133052545 to 133054270	1725	-	unclassified gene	predicted gene 42873
Cpgi13847	3	133091180 to 133092322	1142		CpG island	CpG island 13847
Tssr35744	3	133091736 to 133091762	26	-	TSS region	transcription start site region 35744
Tssr35745	3	133091764 to 133091783	19	-	TSS region	transcription start site region 35745
Tssr35746	3	133091798 to 133091847	49	-	TSS region	transcription start site region 35746
Tssr31768	3	133091827 to 133091842	15	+	TSS region	transcription start site region 31768
Tssr31769	3	133091844 to 133091873	29	+	TSS region	transcription start site region 31769
Ints12	3	133091855 to 133110988	19133	+	protein coding gene	integrator complex subunit 12
Tssr31770	3	133091886 to 133091907	21	+	TSS region	transcription start site region 31770
Tssr31771	3	133091923 to 133091953	30	+	TSS region	transcription start site region 31771
Tssr35747	3	133092029 to 133092039	10	-	TSS region	transcription start site region 35747
Tssr35748	3	133092045 to 133092054	9	-	TSS region	transcription start site region 35748
Tssr35749	3	133092378 to 133092394	16	-	TSS region	transcription start site region 35749
Tssr31772	3	133092570 to 133092611	41	+	TSS region	transcription start site region 31772