Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:132727450-132987457

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbck 3 132684144 to 132841688 157544 + protein coding gene TBC1 domain containing kinase
Tssr31759 3 132737419 to 132737426 7 + TSS region transcription start site region 31759
Tssr31760 3 132743645 to 132743648 3 + TSS region transcription start site region 31760
Tssr31761 3 132766571 to 132766574 3 + TSS region transcription start site region 31761
Gm42872 3 132767407 to 132769373 1966 + unclassified gene predicted gene 42872
Gm30294 3 132772128 to 132782870 10742 - lncRNA gene predicted gene, 30294
Gm22322 3 132787225 to 132787335 110 - snoRNA gene predicted gene, 22322
Tssr35734 3 132791229 to 132791235 6 - TSS region transcription start site region 35734
Gm42876 3 132806253 to 132809467 3214 + unclassified gene predicted gene 42876
Tssr31762 3 132814988 to 132814999 11 + TSS region transcription start site region 31762
Tssr31763 3 132818062 to 132818067 5 + TSS region transcription start site region 31763
Gm29811 3 132842202 to 132878596 36394 - lincRNA gene predicted gene, 29811
Gm9403 3 132842396 to 132844576 2180 + pseudogene predicted gene 9403
Tssr31764 3 132843096 to 132843129 33 + TSS region transcription start site region 31764
Tssr35735 3 132857450 to 132857457 7 - TSS region transcription start site region 35735
Tssr31765 3 132865847 to 132865897 50 + TSS region transcription start site region 31765
Npnt 3 132881745 to 132950291 68546 - protein coding gene nephronectin
Tssr35736 3 132883382 to 132883392 10 - TSS region transcription start site region 35736
Cpgi13844 3 132885715 to 132885960 245 CpG island CpG island 13844
Tssr31766 3 132904814 to 132904866 52 + TSS region transcription start site region 31766
Tssr35737 3 132904865 to 132904983 118 - TSS region transcription start site region 35737
Tssr35738 3 132906754 to 132906765 11 - TSS region transcription start site region 35738
Cpgi13845 3 132929288 to 132929514 226 CpG island CpG island 13845
Gm23196 3 132939870 to 132939976 106 + snRNA gene predicted gene, 23196
D3Mit15 3 132940762 to 132940908 146 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 15
Tssr35739 3 132948426 to 132948453 27 - TSS region transcription start site region 35739
Cpgi13846 3 132949282 to 132950876 1594 CpG island CpG island 13846
Tssr31767 3 132949416 to 132949417 1 + TSS region transcription start site region 31767
Tssr35740 3 132950167 to 132950181 14 - TSS region transcription start site region 35740
Tssr35741 3 132950189 to 132950198 9 - TSS region transcription start site region 35741
Tssr35742 3 132950223 to 132950226 3 - TSS region transcription start site region 35742
Tssr35743 3 132977207 to 132977211 4 - TSS region transcription start site region 35743
Gstcd 3 132982550 to 133091833 109283 - protein coding gene glutathione S-transferase, C-terminal domain containing