Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:132584144-132941688

40 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr1057	3	132592303 to 132592306	3	+	TSS region	transcription start site region 1057
Tssr31752	3	132629814 to 132629831	17	+	TSS region	transcription start site region 31752
Gimd1	3	132629820 to 132645351	15531	+	protein coding gene	GIMAP family P-loop NTPase domain containing 1
Tssr31753	3	132629833 to 132629888	55	+	TSS region	transcription start site region 31753
Tssr31754	3	132629922 to 132629935	13	+	TSS region	transcription start site region 31754
Tssr31755	3	132629944 to 132629963	19	+	TSS region	transcription start site region 31755
Gm9402	3	132655395 to 132655782	387	-	pseudogene	predicted gene 9402
Tssr35731	3	132655799 to 132655811	12	-	TSS region	transcription start site region 35731
Aimp1	3	132660498 to 132683879	23381	-	protein coding gene	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
Cpgi13843	3	132683724 to 132684457	733		CpG island	CpG island 13843
Tssr35732	3	132683824 to 132683856	32	-	TSS region	transcription start site region 35732
Tssr31756	3	132684106 to 132684145	39	+	TSS region	transcription start site region 31756
Tbck	3	132684144 to 132841688	157544	+	protein coding gene	TBC1 domain containing kinase
Tssr31757	3	132684159 to 132684191	32	+	TSS region	transcription start site region 31757
Tssr35733	3	132717501 to 132717504	3	-	TSS region	transcription start site region 35733
Tssr31758	3	132724421 to 132724432	11	+	TSS region	transcription start site region 31758
Tssr31759	3	132737419 to 132737426	7	+	TSS region	transcription start site region 31759
Tssr31760	3	132743645 to 132743648	3	+	TSS region	transcription start site region 31760
Tssr31761	3	132766571 to 132766574	3	+	TSS region	transcription start site region 31761
Gm42872	3	132767407 to 132769373	1966	+	unclassified gene	predicted gene 42872
Gm30294	3	132772128 to 132782870	10742	-	lncRNA gene	predicted gene, 30294
Gm22322	3	132787225 to 132787335	110	-	snoRNA gene	predicted gene, 22322
Tssr35734	3	132791229 to 132791235	6	-	TSS region	transcription start site region 35734
Gm42876	3	132806253 to 132809467	3214	+	unclassified gene	predicted gene 42876
Tssr31762	3	132814988 to 132814999	11	+	TSS region	transcription start site region 31762
Tssr31763	3	132818062 to 132818067	5	+	TSS region	transcription start site region 31763
Gm29811	3	132842202 to 132878596	36394	-	lincRNA gene	predicted gene, 29811
Gm9403	3	132842396 to 132844576	2180	+	pseudogene	predicted gene 9403
Tssr31764	3	132843096 to 132843129	33	+	TSS region	transcription start site region 31764
Tssr35735	3	132857450 to 132857457	7	-	TSS region	transcription start site region 35735
Tssr31765	3	132865847 to 132865897	50	+	TSS region	transcription start site region 31765
Npnt	3	132881745 to 132950291	68546	-	protein coding gene	nephronectin
Tssr35736	3	132883382 to 132883392	10	-	TSS region	transcription start site region 35736
Cpgi13844	3	132885715 to 132885960	245		CpG island	CpG island 13844
Tssr31766	3	132904814 to 132904866	52	+	TSS region	transcription start site region 31766
Tssr35737	3	132904865 to 132904983	118	-	TSS region	transcription start site region 35737
Tssr35738	3	132906754 to 132906765	11	-	TSS region	transcription start site region 35738
Cpgi13845	3	132929288 to 132929514	226		CpG island	CpG island 13845
Gm23196	3	132939870 to 132939976	106	+	snRNA gene	predicted gene, 23196
D3Mit15	3	132940762 to 132940908	146		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 15