Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:132117560-132957665

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dkk2 3 132085292 to 132180304 95012 + protein coding gene dickkopf WNT signaling pathway inhibitor 2
Tssr31750 3 132120120 to 132120130 10 + TSS region transcription start site region 31750
Tssr31751 3 132154919 to 132154923 4 + TSS region transcription start site region 31751
D3Ertd162e 3 132353742 to 132353946 204 DNA segment DNA segment, Chr 3, ERATO Doi 162, expressed
Gm42880 3 132443673 to 132445548 1875 - lincRNA gene predicted gene 42880
Gm30147 3 132479597 to 132500426 20829 + lncRNA gene predicted gene, 30147
Gm25307 3 132537560 to 132537665 105 - snRNA gene predicted gene, 25307
Tssr1057 3 132592303 to 132592306 3 + TSS region transcription start site region 1057
Tssr31752 3 132629814 to 132629831 17 + TSS region transcription start site region 31752
Gimd1 3 132629820 to 132645351 15531 + protein coding gene GIMAP family P-loop NTPase domain containing 1
Tssr31753 3 132629833 to 132629888 55 + TSS region transcription start site region 31753
Tssr31754 3 132629922 to 132629935 13 + TSS region transcription start site region 31754
Tssr31755 3 132629944 to 132629963 19 + TSS region transcription start site region 31755
Gm9402 3 132655395 to 132655782 387 - pseudogene predicted gene 9402
Tssr35731 3 132655799 to 132655811 12 - TSS region transcription start site region 35731
Aimp1 3 132660498 to 132683879 23381 - protein coding gene aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
Cpgi13843 3 132683724 to 132684457 733 CpG island CpG island 13843
Tssr35732 3 132683824 to 132683856 32 - TSS region transcription start site region 35732
Tssr31756 3 132684106 to 132684145 39 + TSS region transcription start site region 31756
Tbck 3 132684144 to 132841688 157544 + protein coding gene TBC1 domain containing kinase
Tssr31757 3 132684159 to 132684191 32 + TSS region transcription start site region 31757
Tssr35733 3 132717501 to 132717504 3 - TSS region transcription start site region 35733
Tssr31758 3 132724421 to 132724432 11 + TSS region transcription start site region 31758
Tssr31759 3 132737419 to 132737426 7 + TSS region transcription start site region 31759
Tssr31760 3 132743645 to 132743648 3 + TSS region transcription start site region 31760
Tssr31761 3 132766571 to 132766574 3 + TSS region transcription start site region 31761
Gm42872 3 132767407 to 132769373 1966 + unclassified gene predicted gene 42872
Gm30294 3 132772128 to 132782870 10742 - lncRNA gene predicted gene, 30294
Gm22322 3 132787225 to 132787335 110 - snoRNA gene predicted gene, 22322
Tssr35734 3 132791229 to 132791235 6 - TSS region transcription start site region 35734
Gm42876 3 132806253 to 132809467 3214 + unclassified gene predicted gene 42876
Tssr31762 3 132814988 to 132814999 11 + TSS region transcription start site region 31762
Tssr31763 3 132818062 to 132818067 5 + TSS region transcription start site region 31763
Gm29811 3 132842202 to 132878596 36394 - lincRNA gene predicted gene, 29811
Gm9403 3 132842396 to 132844576 2180 + pseudogene predicted gene 9403
Tssr31764 3 132843096 to 132843129 33 + TSS region transcription start site region 31764
Tssr35735 3 132857450 to 132857457 7 - TSS region transcription start site region 35735
Tssr31765 3 132865847 to 132865897 50 + TSS region transcription start site region 31765
Npnt 3 132881745 to 132950291 68546 - protein coding gene nephronectin
Tssr35736 3 132883382 to 132883392 10 - TSS region transcription start site region 35736
Cpgi13844 3 132885715 to 132885960 245 CpG island CpG island 13844
Tssr31766 3 132904814 to 132904866 52 + TSS region transcription start site region 31766
Tssr35737 3 132904865 to 132904983 118 - TSS region transcription start site region 35737
Tssr35738 3 132906754 to 132906765 11 - TSS region transcription start site region 35738
Cpgi13845 3 132929288 to 132929514 226 CpG island CpG island 13845
Gm23196 3 132939870 to 132939976 106 + snRNA gene predicted gene, 23196
D3Mit15 3 132940762 to 132940908 146 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 15
Tssr35739 3 132948426 to 132948453 27 - TSS region transcription start site region 35739
Cpgi13846 3 132949282 to 132950876 1594 CpG island CpG island 13846
Tssr31767 3 132949416 to 132949417 1 + TSS region transcription start site region 31767
Tssr35740 3 132950167 to 132950181 14 - TSS region transcription start site region 35740
Tssr35741 3 132950189 to 132950198 9 - TSS region transcription start site region 35741
Tssr35742 3 132950223 to 132950226 3 - TSS region transcription start site region 35742