Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:131222009-131322073

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lef1 3 131110471 to 131224356 113885 + protein coding gene lymphoid enhancer binding factor 1
Tssr31723 3 131222791 to 131222793 2 + TSS region transcription start site region 31723
Tssr31724 3 131223828 to 131223837 9 + TSS region transcription start site region 31724
Tssr31725 3 131223938 to 131223951 13 + TSS region transcription start site region 31725
Hadh 3 131233419 to 131272101 38682 - protein coding gene hydroxyacyl-Coenzyme A dehydrogenase
Tssr35680 3 131233906 to 131233920 14 - TSS region transcription start site region 35680
Tssr35681 3 131234027 to 131234034 7 - TSS region transcription start site region 35681
Tssr35682 3 131234078 to 131234087 9 - TSS region transcription start site region 35682
Tssr35683 3 131234157 to 131234182 25 - TSS region transcription start site region 35683
Cpgi13833 3 131271588 to 131272333 745 CpG island CpG island 13833
Tssr35684 3 131272009 to 131272073 64 - TSS region transcription start site region 35684
Tssr35685 3 131272077 to 131272078 1 - TSS region transcription start site region 35685
Tssr35686 3 131272805 to 131272855 50 - TSS region transcription start site region 35686
Cpgi13834 3 131278040 to 131278215 175 CpG island CpG island 13834
Gm18492 3 131284166 to 131284803 637 - pseudogene predicted gene, 18492
Cyp2u1 3 131290491 to 131303227 12736 - protein coding gene cytochrome P450, family 2, subfamily u, polypeptide 1
Cpgi13835 3 131302538 to 131303466 928 CpG island CpG island 13835
4930534D22Rik 3 131302643 to 131316661 14018 + antisense lncRNA gene RIKEN cDNA 4930534D22 gene
Tssr35687 3 131303144 to 131303223 79 - TSS region transcription start site region 35687
Sgms2 3 131318985 to 131491271 172286 - protein coding gene sphingomyelin synthase 2
Tssr35688 3 131321381 to 131321384 3 - TSS region transcription start site region 35688