Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:13120508-14100511

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm37813 3 13288197 to 13291891 3694 + unclassified gene predicted gene, 37813
Gm37197 3 13429558 to 13429958 400 + pseudogene predicted gene, 37197
Gm2464 3 13470439 to 13471829 1390 - lincRNA gene predicted gene 2464
Cpgi12985 3 13471360 to 13472187 827 CpG island CpG island 12985
Tssr28377 3 13471608 to 13471635 27 + TSS region transcription start site region 28377
Tssr28378 3 13471637 to 13471733 96 + TSS region transcription start site region 28378
Ralyl 3 13471655 to 14182287 710632 + protein coding gene RALY RNA binding protein-like
Tssr28379 3 13471747 to 13471758 11 + TSS region transcription start site region 28379
Tssr28380 3 13472023 to 13472030 7 + TSS region transcription start site region 28380
Tssr28381 3 13472450 to 13472469 19 + TSS region transcription start site region 28381
Tssr821 3 13472633 to 13472670 37 + TSS region transcription start site region 821
Cpgi12986 3 13472730 to 13473423 693 CpG island CpG island 12986
Tssr28382 3 13472871 to 13472927 56 + TSS region transcription start site region 28382
Tssr28383 3 13473205 to 13473218 13 + TSS region transcription start site region 28383
Tssr28384 3 13510011 to 13510016 5 + TSS region transcription start site region 28384
Tssr28385 3 13525946 to 13525947 1 + TSS region transcription start site region 28385
4930539N22Rik 3 13597139 to 13652865 55726 - lncRNA gene RIKEN cDNA 4930539N22 gene
Tssr28386 3 13610508 to 13610511 3 + TSS region transcription start site region 28386
Gm37164 3 13669509 to 13670145 636 - pseudogene predicted gene, 37164
Tssr28387 3 13748927 to 13748930 3 + TSS region transcription start site region 28387
Gm2474 3 13749938 to 13750483 545 + pseudogene predicted gene 2474
Tssr28388 3 13781746 to 13781750 4 + TSS region transcription start site region 28388
Tssr28389 3 13833436 to 13833445 9 + TSS region transcription start site region 28389
Gm19114 3 13838875 to 13840231 1356 - pseudogene predicted gene, 19114
Gm25981 3 13845686 to 13845980 294 + unclassified non-coding RNA gene predicted gene, 25981
C230073O14Rik 3 13847734 to 13850863 3129 unclassified gene RIKEN cDNA C230073O14 gene
Tssr28390 3 13884944 to 13884948 4 + TSS region transcription start site region 28390
Gm41998 3 13914161 to 13934435 20274 - lncRNA gene predicted gene, 41998
Tssr32631 3 13933883 to 13933906 23 - TSS region transcription start site region 32631
Tssr28391 3 13946368 to 13946379 11 + TSS region transcription start site region 28391
Tssr28392 3 13946385 to 13946416 31 + TSS region transcription start site region 28392
Gm22026 3 14029482 to 14029762 280 - unclassified non-coding RNA gene predicted gene, 22026
Gm18661 3 14098042 to 14099016 974 + pseudogene predicted gene, 18661