Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:131183419-131322101

27 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lef1	3	131110471 to 131224356	113885	+	protein coding gene	lymphoid enhancer binding factor 1
Tssr31718	3	131184654 to 131184701	47	+	TSS region	transcription start site region 31718
Tssr31719	3	131189271 to 131189276	5	+	TSS region	transcription start site region 31719
Tssr31720	3	131189791 to 131189795	4	+	TSS region	transcription start site region 31720
6720418B01Rik	3	131191842 to 131192965	1123		unclassified gene	RIKEN cDNA 6720418B01 gene
Tssr31721	3	131200106 to 131200145	39	+	TSS region	transcription start site region 31721
Tssr31722	3	131206520 to 131206524	4	+	TSS region	transcription start site region 31722
Tssr31723	3	131222791 to 131222793	2	+	TSS region	transcription start site region 31723
Tssr31724	3	131223828 to 131223837	9	+	TSS region	transcription start site region 31724
Tssr31725	3	131223938 to 131223951	13	+	TSS region	transcription start site region 31725
Hadh	3	131233419 to 131272101	38682	-	protein coding gene	hydroxyacyl-Coenzyme A dehydrogenase
Tssr35680	3	131233906 to 131233920	14	-	TSS region	transcription start site region 35680
Tssr35681	3	131234027 to 131234034	7	-	TSS region	transcription start site region 35681
Tssr35682	3	131234078 to 131234087	9	-	TSS region	transcription start site region 35682
Tssr35683	3	131234157 to 131234182	25	-	TSS region	transcription start site region 35683
Cpgi13833	3	131271588 to 131272333	745		CpG island	CpG island 13833
Tssr35684	3	131272009 to 131272073	64	-	TSS region	transcription start site region 35684
Tssr35685	3	131272077 to 131272078	1	-	TSS region	transcription start site region 35685
Tssr35686	3	131272805 to 131272855	50	-	TSS region	transcription start site region 35686
Cpgi13834	3	131278040 to 131278215	175		CpG island	CpG island 13834
Gm18492	3	131284166 to 131284803	637	-	pseudogene	predicted gene, 18492
Cyp2u1	3	131290491 to 131303227	12736	-	protein coding gene	cytochrome P450, family 2, subfamily u, polypeptide 1
Cpgi13835	3	131302538 to 131303466	928		CpG island	CpG island 13835
4930534D22Rik	3	131302643 to 131316661	14018	+	antisense lncRNA gene	RIKEN cDNA 4930534D22 gene
Tssr35687	3	131303144 to 131303223	79	-	TSS region	transcription start site region 35687
Sgms2	3	131318985 to 131491271	172286	-	protein coding gene	sphingomyelin synthase 2
Tssr35688	3	131321381 to 131321384	3	-	TSS region	transcription start site region 35688