Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:130785778-131075779

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36443 3 130792092 to 130804021 11929 - lncRNA gene predicted gene, 36443
Tssr31674 3 130817845 to 130817859 14 + TSS region transcription start site region 31674
Tssr31675 3 130817878 to 130817889 11 + TSS region transcription start site region 31675
Tssr31676 3 130817910 to 130817923 13 + TSS region transcription start site region 31676
Cpgi13828 3 130818825 to 130819066 241 CpG island CpG island 13828
2010110G14Rik 3 130838455 to 130937337 98882 - lincRNA gene RIKEN cDNA 2010110G14 gene
Tssr35667 3 130842134 to 130842138 4 - TSS region transcription start site region 35667
Gm5982 3 130846462 to 130846973 511 - pseudogene predicted gene 5982
Gm36520 3 130867279 to 130868777 1498 + lincRNA gene predicted gene, 36520
Gm26090 3 130870949 to 130871076 127 - snoRNA gene predicted gene, 26090
Tssr31677 3 130874025 to 130874067 42 + TSS region transcription start site region 31677
Tssr31678 3 130874071 to 130874096 25 + TSS region transcription start site region 31678
Gm43351 3 130874073 to 130876824 2751 + lincRNA gene predicted gene 43351
Tssr31679 3 130874102 to 130874133 31 + TSS region transcription start site region 31679
Tssr31680 3 130874169 to 130874180 11 + TSS region transcription start site region 31680
Gm43350 3 130884851 to 130885561 710 + unclassified gene predicted gene 43350
Cpgi13829 3 130900137 to 130900668 531 CpG island CpG island 13829
Tssr35668 3 130901482 to 130901521 39 - TSS region transcription start site region 35668
5830437K03Rik 3 130901665 to 130903043 1378 + unclassified gene RIKEN cDNA 5830437K03 gene
Gm43349 3 130923483 to 130924837 1354 - lincRNA gene predicted gene 43349
Gm5855 3 130929366 to 130930670 1304 - pseudogene predicted gene 5855
Tssr35669 3 130930778 to 130930779 1 - TSS region transcription start site region 35669
Tssr31681 3 130936585 to 130936601 16 + TSS region transcription start site region 31681
Cpgi13830 3 130945909 to 130946373 464 CpG island CpG island 13830
Tssr35670 3 130947315 to 130947339 24 - TSS region transcription start site region 35670
Tssr35671 3 130978451 to 130978459 8 - TSS region transcription start site region 35671
Tssr35672 3 131019639 to 131019652 13 - TSS region transcription start site region 35672
Tssr35673 3 131019682 to 131019696 14 - TSS region transcription start site region 35673
A430072C10Rik 3 131023839 to 131026370 2531 - unclassified gene RIKEN cDNA A430072C10 gene