Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:130517448-130735750

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Col25a1	3	130180336 to 130599884	419548	+	protein coding gene	collagen, type XXV, alpha 1
Gm43210	3	130539489 to 130545640	6151	+	unclassified gene	predicted gene 43210
Gm43211	3	130561942 to 130563840	1898	+	unclassified gene	predicted gene 43211
Cpgi13824	3	130575290 to 130575479	189		CpG island	CpG island 13824
Gm42837	3	130592121 to 130594949	2828	+	unclassified gene	predicted gene 42837
Etnppl	3	130617448 to 130635750	18302	+	protein coding gene	ethanolamine phosphate phospholyase
Tssr31672	3	130617564 to 130617583	19	+	TSS region	transcription start site region 31672
Tssr31673	3	130617645 to 130617675	30	+	TSS region	transcription start site region 31673
Gm36322	3	130632009 to 130633392	1383	-	lncRNA gene	predicted gene, 36322
Gm36373	3	130645901 to 130695261	49360	-	lncRNA gene	predicted gene, 36373
Tssr1048	3	130647529 to 130647534	5	+	TSS region	transcription start site region 1048
Ostc	3	130695917 to 130709444	13527	-	protein coding gene	oligosaccharyltransferase complex subunit (non-catalytic)
Gm42998	3	130703579 to 130705949	2370	-	unclassified gene	predicted gene 42998
Cpgi13825	3	130709069 to 130709670	601		CpG island	CpG island 13825
Tssr35661	3	130709392 to 130709417	25	-	TSS region	transcription start site region 35661
Tssr35662	3	130709419 to 130709451	32	-	TSS region	transcription start site region 35662
D3Ertd568e	3	130725567 to 130725796	229		DNA segment	DNA segment, Chr 3, ERATO Doi 568, expressed
Rpl34	3	130726831 to 130730398	3567	-	protein coding gene	ribosomal protein L34
Cpgi13826	3	130729512 to 130730661	1149		CpG island	CpG island 13826
Tssr35663	3	130730279 to 130730288	9	-	TSS region	transcription start site region 35663
Tssr1049	3	130730290 to 130730296	6	-	TSS region	transcription start site region 1049
Tssr35664	3	130730310 to 130730352	42	-	TSS region	transcription start site region 35664
Tssr35665	3	130730375 to 130730386	11	-	TSS region	transcription start site region 35665
Gm42997	3	130730460 to 130771643	41183	+	lincRNA gene	predicted gene 42997
Tssr35666	3	130730496 to 130730506	10	-	TSS region	transcription start site region 35666