Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:130045336-130734884

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sec24b 3 129982759 to 130061553 78794 - protein coding gene Sec24 related gene family, member B (S. cerevisiae)
Tssr35652 3 130052225 to 130052239 14 - TSS region transcription start site region 35652
Cpgi13821 3 130059904 to 130061385 1481 CpG island CpG island 13821
Tssr35653 3 130060673 to 130060733 60 - TSS region transcription start site region 35653
Tssr35654 3 130060735 to 130060758 23 - TSS region transcription start site region 35654
Tssr31665 3 130060767 to 130060791 24 + TSS region transcription start site region 31665
Tssr35655 3 130060810 to 130060826 16 - TSS region transcription start site region 35655
Tssr35656 3 130060838 to 130060849 11 - TSS region transcription start site region 35656
Tssr35657 3 130060850 to 130060865 15 - TSS region transcription start site region 35657
Tssr35658 3 130061019 to 130061030 11 - TSS region transcription start site region 35658
Tssr35659 3 130061485 to 130061508 23 - TSS region transcription start site region 35659
Tssr35660 3 130061567 to 130061585 18 - TSS region transcription start site region 35660
Tssr31666 3 130068390 to 130068391 1 + TSS region transcription start site region 31666
Gm9396 3 130068412 to 130068978 566 + pseudogene predicted gene 9396
Gm42663 3 130080779 to 130081129 350 + pseudogene predicted gene 42663
Gm9397 3 130140380 to 130142042 1662 + pseudogene predicted gene 9397
Cpgi13822 3 130172792 to 130173002 210 CpG island CpG island 13822
Col25a1 3 130180336 to 130599884 419548 + protein coding gene collagen, type XXV, alpha 1
Cpgi13823 3 130180696 to 130181710 1014 CpG island CpG island 13823
Tssr31667 3 130180835 to 130180854 19 + TSS region transcription start site region 31667
Tssr31668 3 130180882 to 130180899 17 + TSS region transcription start site region 31668
Tssr31669 3 130185221 to 130185225 4 + TSS region transcription start site region 31669
Tssr31670 3 130201345 to 130201350 5 + TSS region transcription start site region 31670
Gm22682 3 130205465 to 130205571 106 + snRNA gene predicted gene, 22682
Tssr31671 3 130247036 to 130247039 3 + TSS region transcription start site region 31671
D3Mit357 3 130312624 to 130312718 94 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 357
Tcq12 3 130370000 to 16450000 -113920000 QTL total cholesterol QTL 12
Tssr1047 3 130420628 to 130420629 1 + TSS region transcription start site region 1047
Gm43210 3 130539489 to 130545640 6151 + unclassified gene predicted gene 43210
Gm43211 3 130561942 to 130563840 1898 + unclassified gene predicted gene 43211
Cpgi13824 3 130575290 to 130575479 189 CpG island CpG island 13824
Gm42837 3 130592121 to 130594949 2828 + unclassified gene predicted gene 42837
Etnppl 3 130617448 to 130635750 18302 + protein coding gene ethanolamine phosphate phospholyase
Tssr31672 3 130617564 to 130617583 19 + TSS region transcription start site region 31672
Tssr31673 3 130617645 to 130617675 30 + TSS region transcription start site region 31673
Gm36322 3 130632009 to 130633392 1383 - lncRNA gene predicted gene, 36322
Gm36373 3 130645901 to 130695261 49360 - lncRNA gene predicted gene, 36373
Tssr1048 3 130647529 to 130647534 5 + TSS region transcription start site region 1048
Ostc 3 130695917 to 130709444 13527 - protein coding gene oligosaccharyltransferase complex subunit (non-catalytic)
Gm42998 3 130703579 to 130705949 2370 - unclassified gene predicted gene 42998
Cpgi13825 3 130709069 to 130709670 601 CpG island CpG island 13825
Tssr35661 3 130709392 to 130709417 25 - TSS region transcription start site region 35661
Tssr35662 3 130709419 to 130709451 32 - TSS region transcription start site region 35662
D3Ertd568e 3 130725567 to 130725796 229 DNA segment DNA segment, Chr 3, ERATO Doi 568, expressed
Rpl34 3 130726831 to 130730398 3567 - protein coding gene ribosomal protein L34
Cpgi13826 3 130729512 to 130730661 1149 CpG island CpG island 13826
Tssr35663 3 130730279 to 130730288 9 - TSS region transcription start site region 35663
Tssr1049 3 130730290 to 130730296 6 - TSS region transcription start site region 1049
Tssr35664 3 130730310 to 130730352 42 - TSS region transcription start site region 35664
Tssr35665 3 130730375 to 130730386 11 - TSS region transcription start site region 35665
Gm42997 3 130730460 to 130771643 41183 + lincRNA gene predicted gene 42997
Tssr35666 3 130730496 to 130730506 10 - TSS region transcription start site region 35666