Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:128285987-129212161

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D3Mit319 3 128339594 to 128339768 174 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 319
Bomb1 3 128339594 to 128339768 174 QTL bone marrow pre-B 1
Tssr31620 3 128528691 to 128528694 3 + TSS region transcription start site region 31620
Gm22293 3 128540372 to 128540480 108 + snoRNA gene predicted gene, 22293
Tssr1042 3 128610938 to 128610951 13 + TSS region transcription start site region 1042
Tssr31621 3 128610954 to 128610963 9 + TSS region transcription start site region 31621
Tssr31622 3 128610970 to 128610995 25 + TSS region transcription start site region 31622
Gm43824 3 128610987 to 128887161 276174 + lincRNA gene predicted gene 43824
Gm40148 3 128685593 to 128761603 76010 - lncRNA gene predicted gene, 40148
4933424H11Rik 3 128699533 to 128701550 2017 - lincRNA gene RIKEN cDNA 4933424H11 gene
Gm4410 3 128839833 to 128840513 680 + pseudogene predicted gene 4410
Tssr31623 3 128843778 to 128843781 3 + TSS region transcription start site region 31623
D3Mit145 3 128856356 to 128856504 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 145
D3Mit313 3 128921852 to 128921952 100 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 313
Gm9387 3 128953779 to 128955098 1319 - pseudogene predicted pseudogene 9387
Gm35726 3 128996150 to 129105537 109387 - lncRNA gene predicted gene, 35726
Gm28543 3 129067805 to 129070544 2739 - lincRNA gene predicted gene 28543
Tssr35611 3 129105397 to 129105406 9 - TSS region transcription start site region 35611
Gm40149 3 129176254 to 129198939 22685 - lncRNA gene predicted gene, 40149
Tssr31624 3 129194645 to 129194656 11 + TSS region transcription start site region 31624
Cpgi13804 3 129195194 to 129195382 188 CpG island CpG island 13804
Cpgi13805 3 129199226 to 129200372 1146 CpG island CpG island 13805
Tssr31625 3 129199516 to 129199526 10 + TSS region transcription start site region 31625
Pitx2 3 129199878 to 129219591 19713 + protein coding gene paired-like homeodomain transcription factor 2
Tssr31626 3 129199906 to 129199913 7 + TSS region transcription start site region 31626
Tssr31627 3 129199919 to 129199943 24 + TSS region transcription start site region 31627
Tssr31628 3 129199960 to 129199975 15 + TSS region transcription start site region 31628
Tssr31629 3 129202525 to 129202536 11 + TSS region transcription start site region 31629
Cpgi13806 3 129203613 to 129205181 1568 CpG island CpG island 13806
Cpgi13807 3 129207170 to 129207537 367 CpG island CpG island 13807
Tssr31630 3 129210004 to 129210012 8 + TSS region transcription start site region 31630
Gm27195 3 129210006 to 129211500 1494 + sense intronic lncRNA gene predicted gene 27195
Tssr1043 3 129210016 to 129210024 8 + TSS region transcription start site region 1043