Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:127399076-127599093

38 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cfq3	3	122395162 to 127426367	5031205		QTL	conditioned fear QTL 3
Ank2	3	126921612 to 127499350	577738	-	protein coding gene	ankyrin 2, brain
Gm46824	3	127393905 to 127404040	10135	-	lncRNA gene	predicted gene, 46824
Cpgi13790	3	127408687 to 127408915	228		CpG island	CpG island 13790
Tssr35571	3	127408880 to 127408887	7	-	TSS region	transcription start site region 35571
Tssr35572	3	127408937 to 127408981	44	-	TSS region	transcription start site region 35572
Tssr35573	3	127408986 to 127409008	22	-	TSS region	transcription start site region 35573
Tssr35574	3	127409014 to 127409043	29	-	TSS region	transcription start site region 35574
Tssr35575	3	127409044 to 127409064	20	-	TSS region	transcription start site region 35575
Gm35535	3	127466244 to 127470787	4543	-	lncRNA gene	predicted gene, 35535
Gm43355	3	127479435 to 127481427	1992	-	pseudogene	predicted gene 43355
Gm42525	3	127480179 to 127481190	1011	-	pseudogene	predicted gene 42525
Gm44494	3	127481120 to 127481248	128	+	miRNA gene	predicted gene, 44494
Cpgi13791	3	127498332 to 127499409	1077		CpG island	CpG island 13791
Tssr35576	3	127498986 to 127499038	52	-	TSS region	transcription start site region 35576
Tssr35577	3	127499049 to 127499071	22	-	TSS region	transcription start site region 35577
Tssr35578	3	127499076 to 127499093	17	-	TSS region	transcription start site region 35578
Tssr35579	3	127499095 to 127499137	42	-	TSS region	transcription start site region 35579
Tssr31586	3	127512811 to 127512817	6	+	TSS region	transcription start site region 31586
Gm43354	3	127512900 to 127513245	345	+	pseudogene	predicted gene 43354
Tssr35580	3	127522373 to 127522399	26	-	TSS region	transcription start site region 35580
Larp7	3	127536714 to 127553349	16635	-	protein coding gene	La ribonucleoprotein domain family, member 7
Tssr35581	3	127541424 to 127541464	40	-	TSS region	transcription start site region 35581
Tssr35582	3	127541481 to 127541495	14	-	TSS region	transcription start site region 35582
Tssr31587	3	127545083 to 127545098	15	+	TSS region	transcription start site region 31587
Mirc20	3	127545228 to 127545807	579		complex/cluster/region	microRNA cluster 20, including Mir302b through Mir367
Mir302b	3	127545228 to 127545301	73	+	miRNA gene	microRNA 302b
Mir302c	3	127545363 to 127545430	67	+	miRNA gene	microRNA 302c
Mir302a	3	127545496 to 127545564	68	+	miRNA gene	microRNA 302a
Mir302d	3	127545624 to 127545689	65	+	miRNA gene	microRNA 302d
Mir367	3	127545733 to 127545807	74	+	miRNA gene	microRNA 367
Cpgi13792	3	127552818 to 127553855	1037		CpG island	CpG island 13792
Tssr35583	3	127553019 to 127553033	14	-	TSS region	transcription start site region 35583
Tssr35584	3	127553210 to 127553225	15	-	TSS region	transcription start site region 35584
Tssr35585	3	127553233 to 127553364	131	-	TSS region	transcription start site region 35585
Tssr31588	3	127553462 to 127553512	50	+	TSS region	transcription start site region 31588
Zgrf1	3	127553489 to 127618023	64534	+	protein coding gene	zinc finger, GRF-type containing 1
Gm43729	3	127556228 to 127557561	1333	-	antisense lncRNA gene	predicted gene 43729