Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cfq3 | 3 | 5031205 | QTL | conditioned fear QTL 3 | ||
Ank2 | 3 | 577738 | - | protein coding gene | ankyrin 2, brain | |
Tssr35529 | 3 | 3 | - | TSS region | transcription start site region 35529 | |
Tssr35530 | 3 | 11 | - | TSS region | transcription start site region 35530 | |
Tssr35531 | 3 | 21 | - | TSS region | transcription start site region 35531 | |
Tssr35532 | 3 | 22 | - | TSS region | transcription start site region 35532 | |
Tssr35533 | 3 | 10 | - | TSS region | transcription start site region 35533 | |
Tssr35534 | 3 | 25 | - | TSS region | transcription start site region 35534 | |
Tssr35535 | 3 | 23 | - | TSS region | transcription start site region 35535 | |
Tssr35536 | 3 | 11 | - | TSS region | transcription start site region 35536 | |
Tssr35537 | 3 | 13 | - | TSS region | transcription start site region 35537 | |
Tssr35538 | 3 | 14 | - | TSS region | transcription start site region 35538 | |
Tssr35539 | 3 | 12 | - | TSS region | transcription start site region 35539 | |
A930036I15Rik | 3 | 1044 | - | unclassified gene | RIKEN cDNA A930036I15 gene | |
Tssr35540 | 3 | 5 | - | TSS region | transcription start site region 35540 | |
Gm43322 | 3 | 1611 | - | unclassified gene | predicted gene 43322 | |
Gm43765 | 3 | 892 | - | unclassified gene | predicted gene 43765 | |
Cpgi13786 | 3 | 211 | CpG island | CpG island 13786 | ||
Tssr35541 | 3 | 39 | - | TSS region | transcription start site region 35541 | |
Tssr1040 | 3 | 28 | - | TSS region | transcription start site region 1040 | |
Tssr35542 | 3 | 55 | - | TSS region | transcription start site region 35542 | |
Tssr35543 | 3 | 23 | - | TSS region | transcription start site region 35543 | |
Gm25501 | 3 | 131 | + | snoRNA gene | predicted gene, 25501 | |
Gm43750 | 3 | 2492 | - | unclassified gene | predicted gene 43750 | |
Tssr35544 | 3 | 32 | - | TSS region | transcription start site region 35544 | |
Tssr35545 | 3 | 12 | - | TSS region | transcription start site region 35545 | |
D3Mit348 | 3 | 123 | DNA segment | DNA Segment, Chr 3 Massachusetts Institute of Technology 348 | ||
Cdcs1 | 3 | 123 | QTL | cytokine deficiency colitis susceptibility 1 | ||
Gm43751 | 3 | 3070 | - | unclassified gene | predicted gene 43751 | |
Tssr35546 | 3 | 38 | - | TSS region | transcription start site region 35546 | |
Tssr35547 | 3 | 39 | - | TSS region | transcription start site region 35547 | |
Gm42974 | 3 | 2653 | - | unclassified gene | predicted gene 42974 | |
Tssr35548 | 3 | 4 | - | TSS region | transcription start site region 35548 | |
Gm16958 | 3 | 6984 | + | antisense lncRNA gene | predicted gene, 16958 | |
Tssr35549 | 3 | 12 | - | TSS region | transcription start site region 35549 | |
Cpgi13787 | 3 | 755 | CpG island | CpG island 13787 | ||
Tssr35550 | 3 | 47 | - | TSS region | transcription start site region 35550 | |
Tssr35551 | 3 | 31 | - | TSS region | transcription start site region 35551 | |
Tssr35552 | 3 | 64 | - | TSS region | transcription start site region 35552 | |
Tssr35553 | 3 | 32 | - | TSS region | transcription start site region 35553 | |
Tssr35554 | 3 | 20 | - | TSS region | transcription start site region 35554 | |
Tssr35555 | 3 | 17 | - | TSS region | transcription start site region 35555 | |
Tssr35556 | 3 | 38 | - | TSS region | transcription start site region 35556 | |
C230031I18Rik | 3 | 3697 | - | unclassified gene | RIKEN cDNA C230031I18 gene | |
Tssr35557 | 3 | 2 | - | TSS region | transcription start site region 35557 | |
Tssr35558 | 3 | 4 | - | TSS region | transcription start site region 35558 | |
Tssr35559 | 3 | 4 | - | TSS region | transcription start site region 35559 | |
Cpgi13788 | 3 | 249 | CpG island | CpG island 13788 | ||
Tssr35560 | 3 | 21 | - | TSS region | transcription start site region 35560 | |
Tssr35561 | 3 | 42 | - | TSS region | transcription start site region 35561 | |
Tssr35562 | 3 | 5 | - | TSS region | transcription start site region 35562 | |
Tssr35563 | 3 | 21 | - | TSS region | transcription start site region 35563 | |
Gm42973 | 3 | 3199 | - | unclassified gene | predicted gene 42973 | |
Tssr35564 | 3 | 17 | - | TSS region | transcription start site region 35564 | |
Tssr35565 | 3 | 16 | - | TSS region | transcription start site region 35565 | |
Tssr35566 | 3 | 8 | - | TSS region | transcription start site region 35566 | |
Gm42972 | 3 | 5616 | - | unclassified gene | predicted gene 42972 | |
Tssr35567 | 3 | 9 | - | TSS region | transcription start site region 35567 | |
Tssr35568 | 3 | 17 | - | TSS region | transcription start site region 35568 | |
Tssr35569 | 3 | 3 | - | TSS region | transcription start site region 35569 | |
Tssr35570 | 3 | 30 | - | TSS region | transcription start site region 35570 | |
Gm42971 | 3 | 2078 | - | unclassified gene | predicted gene 42971 | |
Gm42970 | 3 | 1351 | - | unclassified gene | predicted gene 42970 | |
Cpgi13789 | 3 | 325 | CpG island | CpG island 13789 | ||
Gm42969 | 3 | 3630 | - | unclassified gene | predicted gene 42969 | |
D3Mit253 | 3 | 105 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 253 | ||
Gm46824 | 3 | 10135 | - | lncRNA gene | predicted gene, 46824 | |
Cpgi13790 | 3 | 228 | CpG island | CpG island 13790 | ||
Tssr35571 | 3 | 7 | - | TSS region | transcription start site region 35571 | |
Tssr35572 | 3 | 44 | - | TSS region | transcription start site region 35572 | |
Tssr35573 | 3 | 22 | - | TSS region | transcription start site region 35573 | |
Tssr35574 | 3 | 29 | - | TSS region | transcription start site region 35574 | |
Tssr35575 | 3 | 20 | - | TSS region | transcription start site region 35575 | |
Gm35535 | 3 | 4543 | - | lncRNA gene | predicted gene, 35535 | |
Gm43355 | 3 | 1992 | - | pseudogene | predicted gene 43355 | |
Gm42525 | 3 | 1011 | - | pseudogene | predicted gene 42525 | |
Gm44494 | 3 | 128 | + | miRNA gene | predicted gene, 44494 | |
Cpgi13791 | 3 | 1077 | CpG island | CpG island 13791 | ||
Tssr35576 | 3 | 52 | - | TSS region | transcription start site region 35576 | |
Tssr35577 | 3 | 22 | - | TSS region | transcription start site region 35577 | |
Tssr35578 | 3 | 17 | - | TSS region | transcription start site region 35578 | |
Tssr35579 | 3 | 42 | - | TSS region | transcription start site region 35579 | |
Tssr31586 | 3 | 6 | + | TSS region | transcription start site region 31586 | |
Gm43354 | 3 | 345 | + | pseudogene | predicted gene 43354 | |
Tssr35580 | 3 | 26 | - | TSS region | transcription start site region 35580 | |
Larp7 | 3 | 16635 | - | protein coding gene | La ribonucleoprotein domain family, member 7 | |
Tssr35581 | 3 | 40 | - | TSS region | transcription start site region 35581 | |
Tssr35582 | 3 | 14 | - | TSS region | transcription start site region 35582 | |
Tssr31587 | 3 | 15 | + | TSS region | transcription start site region 31587 | |
Mir302b | 3 | 73 | + | miRNA gene | microRNA 302b | |
Mirc20 | 3 | 579 | complex/cluster/region | microRNA cluster 20, including Mir302b through Mir367 | ||
Mir302c | 3 | 67 | + | miRNA gene | microRNA 302c | |
Mir302a | 3 | 68 | + | miRNA gene | microRNA 302a | |
Mir302d | 3 | 65 | + | miRNA gene | microRNA 302d | |
Mir367 | 3 | 74 | + | miRNA gene | microRNA 367 | |
Cpgi13792 | 3 | 1037 | CpG island | CpG island 13792 | ||
Tssr35583 | 3 | 14 | - | TSS region | transcription start site region 35583 | |
Tssr35584 | 3 | 15 | - | TSS region | transcription start site region 35584 | |
Tssr35585 | 3 | 131 | - | TSS region | transcription start site region 35585 | |
Tssr31588 | 3 | 50 | + | TSS region | transcription start site region 31588 | |
Zgrf1 | 3 | 64534 | + | protein coding gene | zinc finger, GRF-type containing 1 | |
Gm43729 | 3 | 1333 | - | antisense lncRNA gene | predicted gene 43729 | |
Cpgi13793 | 3 | 445 | CpG island | CpG island 13793 | ||
Gm40147 | 3 | 1955 | - | lncRNA gene | predicted gene, 40147 | |
Cpgi13794 | 3 | 165 | CpG island | CpG island 13794 | ||
Cpgi13795 | 3 | 237 | CpG island | CpG island 13795 | ||
Cpgi13796 | 3 | 2541 | CpG island | CpG island 13796 | ||
Tssr31589 | 3 | 27 | + | TSS region | transcription start site region 31589 | |
Tssr31590 | 3 | 12 | + | TSS region | transcription start site region 31590 | |
Tssr31591 | 3 | 6 | + | TSS region | transcription start site region 31591 | |
Neurog2 | 3 | 2486 | + | protein coding gene | neurogenin 2 | |
Tssr31592 | 3 | 15 | + | TSS region | transcription start site region 31592 | |
Cpgi13797 | 3 | 462 | CpG island | CpG island 13797 | ||
Alpk1 | 3 | 110217 | - | protein coding gene | alpha-kinase 1 | |
Tssr35586 | 3 | 14 | - | TSS region | transcription start site region 35586 | |
Tssr35587 | 3 | 35 | - | TSS region | transcription start site region 35587 | |
Tssr35588 | 3 | 13 | - | TSS region | transcription start site region 35588 | |
Gm16238 | 3 | 585 | - | pseudogene | predicted gene 16238 | |
Tssr35589 | 3 | 2 | - | TSS region | transcription start site region 35589 | |
Cpgi13798 | 3 | 377 | CpG island | CpG island 13798 | ||
D3Mit109 | 3 | 231 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 109 | ||
1500005C15Rik | 3 | 2393 | - | unclassified gene | RIKEN cDNA 1500005C15 gene | |
Gm42587 | 3 | 1980 | - | unclassified gene | predicted gene 42587 | |
Gm23279 | 3 | 96 | + | rRNA gene | predicted gene, 23279 | |
Tssr35590 | 3 | 8 | - | TSS region | transcription start site region 35590 | |
Tssr35591 | 3 | 10 | - | TSS region | transcription start site region 35591 | |
Cpgi13799 | 3 | 373 | CpG island | CpG island 13799 | ||
Tssr35592 | 3 | 28 | - | TSS region | transcription start site region 35592 | |
Tssr35593 | 3 | 12 | - | TSS region | transcription start site region 35593 | |
Tssr35594 | 3 | 38 | - | TSS region | transcription start site region 35594 | |
Tssr35595 | 3 | 29 | - | TSS region | transcription start site region 35595 | |
Tssr35596 | 3 | 11 | - | TSS region | transcription start site region 35596 | |
Tssr35597 | 3 | 68 | - | TSS region | transcription start site region 35597 | |
Tssr31593 | 3 | 9 | + | TSS region | transcription start site region 31593 | |
Tifa | 3 | 9257 | + | protein coding gene | TRAF-interacting protein with forkhead-associated domain | |
Tssr31594 | 3 | 15 | + | TSS region | transcription start site region 31594 | |
Tssr31595 | 3 | 10 | + | TSS region | transcription start site region 31595 | |
Tssr31596 | 3 | 24 | + | TSS region | transcription start site region 31596 | |
Tssr31597 | 3 | 16 | + | TSS region | transcription start site region 31597 | |
Tssr31598 | 3 | 13 | + | TSS region | transcription start site region 31598 | |
Cpgi13800 | 3 | 631 | CpG island | CpG island 13800 | ||
Tssr35598 | 3 | 16 | - | TSS region | transcription start site region 35598 | |
Tssr31599 | 3 | 7 | + | TSS region | transcription start site region 31599 | |
Tssr35599 | 3 | 14 | - | TSS region | transcription start site region 35599 | |
Tssr35600 | 3 | 25 | - | TSS region | transcription start site region 35600 | |
Tssr31600 | 3 | 11 | + | TSS region | transcription start site region 31600 | |
Tssr35601 | 3 | 32 | - | TSS region | transcription start site region 35601 | |
Tssr31601 | 3 | 29 | + | TSS region | transcription start site region 31601 | |
Tssr31602 | 3 | 42 | + | TSS region | transcription start site region 31602 | |
Tssr31603 | 3 | 15 | + | TSS region | transcription start site region 31603 | |
Tssr31604 | 3 | 22 | + | TSS region | transcription start site region 31604 | |
Tssr35602 | 3 | 17 | - | TSS region | transcription start site region 35602 | |
Tssr31605 | 3 | 37 | + | TSS region | transcription start site region 31605 | |
Cpgi13801 | 3 | 311 | CpG island | CpG island 13801 | ||
Tssr31606 | 3 | 25 | + | TSS region | transcription start site region 31606 | |
Tssr31607 | 3 | 11 | + | TSS region | transcription start site region 31607 | |
Tssr31608 | 3 | 39 | + | TSS region | transcription start site region 31608 | |
Tssr31609 | 3 | 27 | + | TSS region | transcription start site region 31609 | |
Tssr31610 | 3 | 11 | + | TSS region | transcription start site region 31610 | |
Tssr31611 | 3 | 16 | + | TSS region | transcription start site region 31611 | |
Tssr31612 | 3 | 15 | + | TSS region | transcription start site region 31612 | |
Tssr31613 | 3 | 18 | + | TSS region | transcription start site region 31613 | |
Ap1ar | 3 | 30511 | - | protein coding gene | adaptor-related protein complex 1 associated regulatory protein | |
Tssr35603 | 3 | 7 | - | TSS region | transcription start site region 35603 | |
Gm43654 | 3 | 3416 | - | unclassified gene | predicted gene 43654 | |
Cpgi13802 | 3 | 1148 | CpG island | CpG island 13802 | ||
Gm43653 | 3 | 1733 | + | antisense lncRNA gene | predicted gene 43653 | |
Tssr35604 | 3 | 86 | - | TSS region | transcription start site region 35604 | |
Tssr31614 | 3 | 30 | + | TSS region | transcription start site region 31614 | |
Gm35585 | 3 | 3662 | + | lincRNA gene | predicted gene, 35585 | |
Gm43652 | 3 | 674 | - | unclassified gene | predicted gene 43652 | |
Fam241a | 3 | 26635 | - | protein coding gene | family with sequence similarity 241, member A | |
Tssr35605 | 3 | 9 | - | TSS region | transcription start site region 35605 | |
Tssr35606 | 3 | 4 | - | TSS region | transcription start site region 35606 | |
Tssr35607 | 3 | 5 | - | TSS region | transcription start site region 35607 | |
Cpgi13803 | 3 | 809 | CpG island | CpG island 13803 | ||
Tssr35608 | 3 | 13 | - | TSS region | transcription start site region 35608 | |
Tssr35609 | 3 | 23 | - | TSS region | transcription start site region 35609 | |
Tssr35610 | 3 | 66 | - | TSS region | transcription start site region 35610 | |
Tssr31615 | 3 | 5 | + | TSS region | transcription start site region 31615 | |
9830132P13Rik | 3 | 39048 | + | lincRNA gene | RIKEN cDNA 9830132P13 gene | |
Tssr31616 | 3 | 18 | + | TSS region | transcription start site region 31616 | |
Tssr31617 | 3 | 26 | + | TSS region | transcription start site region 31617 | |
Tssr31618 | 3 | 5 | + | TSS region | transcription start site region 31618 |