Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:125896327-126558357

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ugt8a 3 125865271 to 125938619 73348 - protein coding gene UDP galactosyltransferase 8A
Gm40145 3 125896544 to 125900599 4055 + lncRNA gene predicted gene, 40145
Tssr35515 3 125935930 to 125935934 4 - TSS region transcription start site region 35515
Cpgi13783 3 125937570 to 125939276 1706 CpG island CpG island 13783
Tssr35516 3 125938484 to 125938496 12 - TSS region transcription start site region 35516
Tssr35517 3 125938497 to 125938517 20 - TSS region transcription start site region 35517
Tssr35518 3 125938522 to 125938536 14 - TSS region transcription start site region 35518
Tssr35519 3 125938537 to 125938605 68 - TSS region transcription start site region 35519
Tssr35520 3 125938606 to 125938617 11 - TSS region transcription start site region 35520
D3Ertd229e 3 125958200 to 125958447 247 DNA segment DNA segment, Chr 3, ERATO Doi 229, expressed
Tssr35521 3 125978639 to 125978650 11 - TSS region transcription start site region 35521
Tssr31562 3 126106691 to 126106710 19 + TSS region transcription start site region 31562
Gm40146 3 126106710 to 126183716 77006 + lncRNA gene predicted gene, 40146
Gm26275 3 126152456 to 126152723 267 - unclassified non-coding RNA gene predicted gene, 26275
Gm42827 3 126226327 to 126228357 2030 + lincRNA gene predicted gene 42827
Gm18916 3 126278030 to 126279275 1245 + pseudogene predicted gene, 18916
D3Mit159 3 126294151 to 126294299 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 159
Cpgi13784 3 126363685 to 126364291 606 CpG island CpG island 13784
Arsj 3 126363852 to 126440374 76522 + protein coding gene arylsulfatase J
Tssr31563 3 126363908 to 126363954 46 + TSS region transcription start site region 31563
Gm35408 3 126365553 to 126380842 15289 - lncRNA gene predicted gene, 35408
Gm35351 3 126386296 to 126407200 20904 - lncRNA gene predicted gene, 35351
Gm17225 3 126432883 to 126439269 6386 - antisense lncRNA gene predicted gene 17225
Gm43327 3 126441012 to 126445066 4054 + unclassified gene predicted gene 43327
Tssr31564 3 126447720 to 126447721 1 + TSS region transcription start site region 31564
Gm20568 3 126447743 to 126447950 207 + pseudogene predicted gene, 20568
Gm46823 3 126468347 to 126519928 51581 + lncRNA gene predicted gene, 46823
Tssr31565 3 126520499 to 126520506 7 + TSS region transcription start site region 31565