Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:123946574-125056703

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Emrq3 3 123433893 to 123971849 537956 QTL emotional reactivity QTL 3
D3Dcr16 3 123971711 to 123971847 136 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 16
D3Mit199 3 123971716 to 123971849 133 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 199
Gm15399 3 123984097 to 123985104 1007 - pseudogene predicted gene 15399
Gm40144 3 124007517 to 124028971 21454 + lncRNA gene predicted gene, 40144
Gm43731 3 124246237 to 124318984 72747 + lincRNA gene predicted gene 43731
Gm9372 3 124292076 to 124292505 429 + pseudogene predicted gene 9372
Tssr35510 3 124300737 to 124300746 9 - TSS region transcription start site region 35510
Gm42824 3 124304184 to 124304430 246 - pseudogene predicted gene 42824
Cpgi13782 3 124320783 to 124321559 776 CpG island CpG island 13782
Tssr31555 3 124321031 to 124321113 82 + TSS region transcription start site region 31555
Tram1l1 3 124321037 to 124323260 2223 + protein coding gene translocation associated membrane protein 1-like 1
Tssr31556 3 124321142 to 124321153 11 + TSS region transcription start site region 31556
Tssr31557 3 124385667 to 124385680 13 + TSS region transcription start site region 31557
Gm4617 3 124385667 to 124385997 330 + pseudogene predicted pseudogene 4617
4921527H02Rik 3 124398086 to 124399758 1672 - unclassified gene RIKEN cDNA 4921527H02 gene
1700006A11Rik 3 124400984 to 124426028 25044 - protein coding gene RIKEN cDNA 1700006A11 gene
Gm22575 3 124410655 to 124410764 109 + snRNA gene predicted gene, 22575
Gm42823 3 124420429 to 124422125 1696 + antisense lncRNA gene predicted gene 42823
Tssr35511 3 124425989 to 124425996 7 - TSS region transcription start site region 35511
Tssr35512 3 124426003 to 124426012 9 - TSS region transcription start site region 35512
Tssr35513 3 124426026 to 124426031 5 - TSS region transcription start site region 35513
Gm22900 3 124501574 to 124501703 129 + snoRNA gene predicted gene, 22900
1700003H04Rik 3 124565891 to 124581091 15200 - protein coding gene RIKEN cDNA 1700003H04 gene
Tssr35514 3 124581076 to 124581097 21 - TSS region transcription start site region 35514
Gm9379 3 124588528 to 124589147 619 - pseudogene predicted gene 9379
D3Mit81 3 124771462 to 124771591 129 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 81
Gm42825 3 124839509 to 124936860 97351 + lincRNA gene predicted gene 42825
Gm23673 3 124848589 to 124848886 297 + unclassified non-coding RNA gene predicted gene, 23673
Gm9381 3 125042262 to 125043273 1011 - pseudogene predicted gene 9381