Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:122730091-122866980

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13771 3 122728792 to 122730935 2143 CpG island CpG island 13771
Pde5a 3 122729158 to 122859374 130216 + protein coding gene phosphodiesterase 5A, cGMP-specific
Tssr31519 3 122730113 to 122730119 6 + TSS region transcription start site region 31519
Tssr31520 3 122730136 to 122730153 17 + TSS region transcription start site region 31520
Tssr31521 3 122730216 to 122730239 23 + TSS region transcription start site region 31521
Tssr31522 3 122730252 to 122730261 9 + TSS region transcription start site region 31522
Gm34139 3 122788221 to 122788514 293 - pseudogene predicted gene, 34139
4930447N08Rik 3 122795091 to 122801980 6889 - lncRNA gene RIKEN cDNA 4930447N08 gene
Tssr35465 3 122801985 to 122801992 7 - TSS region transcription start site region 35465
Tssr35466 3 122801993 to 122802008 15 - TSS region transcription start site region 35466
Tssr35467 3 122802012 to 122802018 6 - TSS region transcription start site region 35467
Tssr35468 3 122802019 to 122802045 26 - TSS region transcription start site region 35468
Gm34577 3 122812525 to 122850453 37928 - lncRNA gene predicted gene, 34577
Tssr31523 3 122834349 to 122834359 10 + TSS region transcription start site region 31523
Tssr31524 3 122834495 to 122834503 8 + TSS region transcription start site region 31524
Tssr31525 3 122834560 to 122834584 24 + TSS region transcription start site region 31525
Tssr31526 3 122834754 to 122834771 17 + TSS region transcription start site region 31526
Tssr31527 3 122834781 to 122834798 17 + TSS region transcription start site region 31527
Tssr31528 3 122856426 to 122856440 14 + TSS region transcription start site region 31528
Tssr31529 3 122860269 to 122860270 1 + TSS region transcription start site region 31529
Gm9364 3 122861913 to 122862372 459 + pseudogene predicted gene 9364