Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:122519712-122719723

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcar3 3 122419780 to 122530191 110411 + protein coding gene breast cancer anti-estrogen resistance 3
Fnbp1l 3 122538719 to 122619714 80995 - protein coding gene formin binding protein 1-like
Tssr35451 3 122539544 to 122539549 5 - TSS region transcription start site region 35451
Mir7657 3 122541625 to 122541681 56 - miRNA gene microRNA 7657
Tssr35452 3 122551534 to 122551541 7 - TSS region transcription start site region 35452
Tssr35453 3 122552338 to 122552341 3 - TSS region transcription start site region 35453
Tssr35454 3 122559099 to 122559116 17 - TSS region transcription start site region 35454
Gm43569 3 122565050 to 122574740 9690 + antisense lncRNA gene predicted gene 43569
Tssr31506 3 122566719 to 122566739 20 + TSS region transcription start site region 31506
Tssr35455 3 122568785 to 122568808 23 - TSS region transcription start site region 35455
Tssr35456 3 122569710 to 122569749 39 - TSS region transcription start site region 35456
Gm42994 3 122574524 to 122577072 2548 - unclassified gene predicted gene 42994
Tssr35457 3 122590198 to 122590211 13 - TSS region transcription start site region 35457
Tssr35458 3 122612221 to 122612226 5 - TSS region transcription start site region 35458
Cpgi13770 3 122618384 to 122620364 1980 CpG island CpG island 13770
Tssr35459 3 122619442 to 122619463 21 - TSS region transcription start site region 35459
Tssr35460 3 122619663 to 122619680 17 - TSS region transcription start site region 35460
Tssr35461 3 122619683 to 122619698 15 - TSS region transcription start site region 35461
Tssr35462 3 122619712 to 122619723 11 - TSS region transcription start site region 35462
Tssr35463 3 122619737 to 122619748 11 - TSS region transcription start site region 35463
Gm43568 3 122622255 to 122630168 7913 - lincRNA gene predicted gene 43568
Tssr35464 3 122629743 to 122629766 23 - TSS region transcription start site region 35464
Gm5981 3 122632785 to 122633271 486 - pseudogene predicted gene 5981
Gm40140 3 122662220 to 122684080 21860 - lncRNA gene predicted gene, 40140
Tssr31507 3 122690754 to 122690755 1 + TSS region transcription start site region 31507
D3Mit80 3 122693359 to 122693549 190 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 80