Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Bcar3 | 3 | 110411 | + | protein coding gene | breast cancer anti-estrogen resistance 3 | |
Gm34349 | 3 | 6633 | - | lncRNA gene | predicted gene, 34349 | |
Tssr31499 | 3 | 23 | + | TSS region | transcription start site region 31499 | |
Tssr31500 | 3 | 7 | + | TSS region | transcription start site region 31500 | |
Cpgi13769 | 3 | 440 | CpG island | CpG island 13769 | ||
Tssr31501 | 3 | 4 | + | TSS region | transcription start site region 31501 | |
Tssr31502 | 3 | 21 | + | TSS region | transcription start site region 31502 | |
Tssr31503 | 3 | 12 | + | TSS region | transcription start site region 31503 | |
Tssr31504 | 3 | 3 | + | TSS region | transcription start site region 31504 | |
Tssr31505 | 3 | 36 | + | TSS region | transcription start site region 31505 | |
Tssr35450 | 3 | 50 | - | TSS region | transcription start site region 35450 | |
Fnbp1l | 3 | 80995 | - | protein coding gene | formin binding protein 1-like | |
Tssr35451 | 3 | 5 | - | TSS region | transcription start site region 35451 | |
Mir7657 | 3 | 56 | - | miRNA gene | microRNA 7657 | |
Tssr35452 | 3 | 7 | - | TSS region | transcription start site region 35452 | |
Tssr35453 | 3 | 3 | - | TSS region | transcription start site region 35453 | |
Tssr35454 | 3 | 17 | - | TSS region | transcription start site region 35454 | |
Gm43569 | 3 | 9690 | + | antisense lncRNA gene | predicted gene 43569 | |
Tssr31506 | 3 | 20 | + | TSS region | transcription start site region 31506 | |
Tssr35455 | 3 | 23 | - | TSS region | transcription start site region 35455 | |
Tssr35456 | 3 | 39 | - | TSS region | transcription start site region 35456 | |
Gm42994 | 3 | 2548 | - | unclassified gene | predicted gene 42994 | |
Tssr35457 | 3 | 13 | - | TSS region | transcription start site region 35457 | |
Tssr35458 | 3 | 5 | - | TSS region | transcription start site region 35458 | |
Cpgi13770 | 3 | 1980 | CpG island | CpG island 13770 | ||
Tssr35459 | 3 | 21 | - | TSS region | transcription start site region 35459 | |
Tssr35460 | 3 | 17 | - | TSS region | transcription start site region 35460 | |
Tssr35461 | 3 | 15 | - | TSS region | transcription start site region 35461 | |
Tssr35462 | 3 | 11 | - | TSS region | transcription start site region 35462 | |
Tssr35463 | 3 | 11 | - | TSS region | transcription start site region 35463 | |
Gm43568 | 3 | 7913 | - | lincRNA gene | predicted gene 43568 | |
Tssr35464 | 3 | 23 | - | TSS region | transcription start site region 35464 | |
Gm5981 | 3 | 486 | - | pseudogene | predicted gene 5981 | |
Gm40140 | 3 | 21860 | - | lncRNA gene | predicted gene, 40140 | |
Tssr31507 | 3 | 1 | + | TSS region | transcription start site region 31507 | |
D3Mit80 | 3 | 190 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 80 | ||
Tssr31508 | 3 | 42 | + | TSS region | transcription start site region 31508 | |
Cpgi13771 | 3 | 2143 | CpG island | CpG island 13771 | ||
Tssr31509 | 3 | 51 | + | TSS region | transcription start site region 31509 | |
Tssr31510 | 3 | 11 | + | TSS region | transcription start site region 31510 | |
Tssr31511 | 3 | 15 | + | TSS region | transcription start site region 31511 | |
Pde5a | 3 | 130216 | + | protein coding gene | phosphodiesterase 5A, cGMP-specific | |
Tssr31512 | 3 | 19 | + | TSS region | transcription start site region 31512 | |
Tssr31513 | 3 | 35 | + | TSS region | transcription start site region 31513 | |
Tssr31514 | 3 | 26 | + | TSS region | transcription start site region 31514 | |
Tssr31515 | 3 | 19 | + | TSS region | transcription start site region 31515 | |
Tssr31516 | 3 | 24 | + | TSS region | transcription start site region 31516 | |
Tssr31517 | 3 | 11 | + | TSS region | transcription start site region 31517 | |
Tssr31518 | 3 | 10 | + | TSS region | transcription start site region 31518 | |
Tssr31519 | 3 | 6 | + | TSS region | transcription start site region 31519 | |
Tssr31520 | 3 | 17 | + | TSS region | transcription start site region 31520 | |
Tssr31521 | 3 | 23 | + | TSS region | transcription start site region 31521 | |
Tssr31522 | 3 | 9 | + | TSS region | transcription start site region 31522 | |
Gm34139 | 3 | 293 | - | pseudogene | predicted gene, 34139 | |
4930447N08Rik | 3 | 6889 | - | lncRNA gene | RIKEN cDNA 4930447N08 gene | |
Tssr35465 | 3 | 7 | - | TSS region | transcription start site region 35465 | |
Tssr35466 | 3 | 15 | - | TSS region | transcription start site region 35466 | |
Tssr35467 | 3 | 6 | - | TSS region | transcription start site region 35467 | |
Tssr35468 | 3 | 26 | - | TSS region | transcription start site region 35468 | |
Gm34577 | 3 | 37928 | - | lncRNA gene | predicted gene, 34577 | |
Tssr31523 | 3 | 10 | + | TSS region | transcription start site region 31523 | |
Tssr31524 | 3 | 8 | + | TSS region | transcription start site region 31524 | |
Tssr31525 | 3 | 24 | + | TSS region | transcription start site region 31525 | |
Tssr31526 | 3 | 17 | + | TSS region | transcription start site region 31526 | |
Tssr31527 | 3 | 17 | + | TSS region | transcription start site region 31527 | |
Tssr31528 | 3 | 14 | + | TSS region | transcription start site region 31528 | |
Tssr31529 | 3 | 1 | + | TSS region | transcription start site region 31529 | |
Gm9364 | 3 | 459 | + | pseudogene | predicted gene 9364 | |
Tssr35469 | 3 | 9 | - | TSS region | transcription start site region 35469 | |
Tssr35470 | 3 | 27 | - | TSS region | transcription start site region 35470 | |
4933405D12Rik | 3 | 41524 | - | antisense lncRNA gene | RIKEN cDNA 4933405D12 gene | |
Tssr31530 | 3 | 8 | + | TSS region | transcription start site region 31530 | |
Fabp2 | 3 | 4434 | + | protein coding gene | fatty acid binding protein 2, intestinal | |
Tssr31531 | 3 | 15 | + | TSS region | transcription start site region 31531 | |
Tssr31532 | 3 | 40 | + | TSS region | transcription start site region 31532 | |
D3Mit108.1 | 3 | 123 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 108.1 | ||
D3Mit108 | 3 | 314 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 108 | ||
Tssr31533 | 3 | 46 | + | TSS region | transcription start site region 31533 | |
Tssr31534 | 3 | 16 | + | TSS region | transcription start site region 31534 | |
Tssr35471 | 3 | 5 | - | TSS region | transcription start site region 35471 | |
Gm10959 | 3 | 6290 | - | protein coding gene | predicted gene 10959 | |
Cpgi13772 | 3 | 518 | CpG island | CpG island 13772 | ||
Tssr35472 | 3 | 42 | - | TSS region | transcription start site region 35472 | |
Tssr31535 | 3 | 49 | + | TSS region | transcription start site region 31535 | |
1810037I17Rik | 3 | 1797 | + | protein coding gene | RIKEN cDNA 1810037I17 gene | |
Tssr31536 | 3 | 39 | + | TSS region | transcription start site region 31536 | |
Usp53 | 3 | 52961 | - | protein coding gene | ubiquitin specific peptidase 53 | |
Cpgi13773 | 3 | 1232 | CpG island | CpG island 13773 | ||
Tssr35473 | 3 | 24 | - | TSS region | transcription start site region 35473 | |
Tssr35474 | 3 | 18 | - | TSS region | transcription start site region 35474 | |
Tssr35475 | 3 | 108 | - | TSS region | transcription start site region 35475 | |
Tssr31537 | 3 | 29 | + | TSS region | transcription start site region 31537 | |
Gm43285 | 3 | 3591 | + | unclassified gene | predicted gene 43285 | |
Myoz2 | 3 | 28797 | - | protein coding gene | myozenin 2 | |
Gm22066 | 3 | 109 | - | miRNA gene | predicted gene, 22066 | |
Tssr31538 | 3 | 27 | + | TSS region | transcription start site region 31538 | |
Tssr35476 | 3 | 4 | - | TSS region | transcription start site region 35476 | |
Tssr35477 | 3 | 11 | - | TSS region | transcription start site region 35477 | |
Tssr35478 | 3 | 13 | - | TSS region | transcription start site region 35478 | |
Tssr35479 | 3 | 8 | - | TSS region | transcription start site region 35479 | |
Tssr35480 | 3 | 11 | - | TSS region | transcription start site region 35480 | |
Tssr35481 | 3 | 52 | - | TSS region | transcription start site region 35481 | |
Tssr35482 | 3 | 2 | - | TSS region | transcription start site region 35482 | |
Gm43286 | 3 | 423 | - | pseudogene | predicted gene 43286 | |
Synpo2 | 3 | 159630 | - | protein coding gene | synaptopodin 2 | |
Tssr31539 | 3 | 5 | + | TSS region | transcription start site region 31539 | |
Tssr35483 | 3 | 21 | - | TSS region | transcription start site region 35483 | |
Tssr35484 | 3 | 3 | - | TSS region | transcription start site region 35484 | |
Tssr35485 | 3 | 14 | - | TSS region | transcription start site region 35485 | |
Tssr35486 | 3 | 11 | - | TSS region | transcription start site region 35486 | |
Tssr35487 | 3 | 30 | - | TSS region | transcription start site region 35487 | |
Tssr35488 | 3 | 17 | - | TSS region | transcription start site region 35488 | |
Tssr35489 | 3 | 37 | - | TSS region | transcription start site region 35489 | |
Tssr35490 | 3 | 22 | - | TSS region | transcription start site region 35490 | |
Cpgi13774 | 3 | 170 | CpG island | CpG island 13774 | ||
Tssr35491 | 3 | 11 | - | TSS region | transcription start site region 35491 | |
Tssr35492 | 3 | 38 | - | TSS region | transcription start site region 35492 | |
Tssr35493 | 3 | 5 | - | TSS region | transcription start site region 35493 | |
Tssr35494 | 3 | 3 | - | TSS region | transcription start site region 35494 | |
Tssr35495 | 3 | 9 | - | TSS region | transcription start site region 35495 | |
Gm43744 | 3 | 687 | + | pseudogene | predicted gene 43744 | |
Gm43287 | 3 | 599 | - | unclassified gene | predicted gene 43287 | |
Gm43288 | 3 | 2627 | - | unclassified gene | predicted gene 43288 | |
Gm43283 | 3 | 2547 | - | unclassified gene | predicted gene 43283 | |
Tssr35496 | 3 | 4 | - | TSS region | transcription start site region 35496 | |
Cpgi13775 | 3 | 360 | CpG island | CpG island 13775 | ||
Tssr35497 | 3 | 11 | - | TSS region | transcription start site region 35497 | |
Tssr35498 | 3 | 23 | - | TSS region | transcription start site region 35498 | |
Tssr31540 | 3 | 11 | + | TSS region | transcription start site region 31540 | |
Tssr31541 | 3 | 27 | + | TSS region | transcription start site region 31541 | |
Cpgi13776 | 3 | 1267 | CpG island | CpG island 13776 | ||
Tssr31542 | 3 | 21 | + | TSS region | transcription start site region 31542 | |
Tssr31543 | 3 | 13 | + | TSS region | transcription start site region 31543 | |
Tssr31544 | 3 | 55 | + | TSS region | transcription start site region 31544 | |
Sec24d | 3 | 98145 | + | protein coding gene | Sec24 related gene family, member D (S. cerevisiae) | |
Tssr31545 | 3 | 13 | + | TSS region | transcription start site region 31545 | |
Tssr31546 | 3 | 26 | + | TSS region | transcription start site region 31546 | |
Tssr31547 | 3 | 48 | + | TSS region | transcription start site region 31547 | |
Gm40142 | 3 | 5009 | - | lncRNA gene | predicted gene, 40142 | |
Tssr31548 | 3 | 33 | + | TSS region | transcription start site region 31548 | |
Mettl14 | 3 | 17695 | - | protein coding gene | methyltransferase like 14 | |
Tssr35499 | 3 | 4 | - | TSS region | transcription start site region 35499 | |
Cpgi13777 | 3 | 342 | CpG island | CpG island 13777 | ||
Tssr35500 | 3 | 68 | - | TSS region | transcription start site region 35500 | |
Tssr35501 | 3 | 16 | - | TSS region | transcription start site region 35501 | |
Gm22713 | 3 | 129 | - | snRNA gene | predicted gene, 22713 | |
Tssr31549 | 3 | 12 | + | TSS region | transcription start site region 31549 | |
D3Mit216 | 3 | 121 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 216 | ||
Emrq3 | 3 | 537956 | QTL | emotional reactivity QTL 3 | ||
Gm40143 | 3 | 3641 | + | lncRNA gene | predicted gene, 40143 | |
Cpgi13778 | 3 | 416 | CpG island | CpG island 13778 | ||
Gm35065 | 3 | 3119 | - | antisense lncRNA gene | predicted gene, 35065 | |
Cpgi13779 | 3 | 1185 | CpG island | CpG island 13779 | ||
Prss12 | 3 | 59684 | + | protein coding gene | protease, serine 12 neurotrypsin (motopsin) | |
Tssr31550 | 3 | 37 | + | TSS region | transcription start site region 31550 | |
Gm43590 | 3 | 386 | + | unclassified gene | predicted gene 43590 | |
Snhg8 | 3 | 784 | - | lncRNA gene | small nucleolar RNA host gene 8 | |
Snora24 | 3 | 129 | - | snoRNA gene | small nucleolar RNA, H/ACA box 24 | |
Cpgi13780 | 3 | 1020 | CpG island | CpG island 13780 | ||
Tssr35502 | 3 | 11 | - | TSS region | transcription start site region 35502 | |
Tssr31551 | 3 | 18 | + | TSS region | transcription start site region 31551 | |
Tssr31552 | 3 | 27 | + | TSS region | transcription start site region 31552 | |
Tssr35503 | 3 | 14 | - | TSS region | transcription start site region 35503 | |
Gm9369 | 3 | 732 | - | pseudogene | predicted pseudogene 9369 | |
Ndst3 | 3 | 164687 | - | protein coding gene | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 | |
D3Mit318 | 3 | 147 | DNA segment | DNA Segment, Chr 3, Massachusetts Institute of Technology 318 | ||
Tssr35504 | 3 | 20 | - | TSS region | transcription start site region 35504 | |
Gm42510 | 3 | 2257 | - | unclassified gene | predicted gene 42510 | |
Tssr35505 | 3 | 1 | - | TSS region | transcription start site region 35505 | |
Tssr35506 | 3 | 53 | - | TSS region | transcription start site region 35506 | |
Cpgi13781 | 3 | 679 | CpG island | CpG island 13781 | ||
Tssr35507 | 3 | 59 | - | TSS region | transcription start site region 35507 | |
Tssr35508 | 3 | 41 | - | TSS region | transcription start site region 35508 | |
Tssr35509 | 3 | 33 | - | TSS region | transcription start site region 35509 | |
Tssr31553 | 3 | 17 | + | TSS region | transcription start site region 31553 | |
Gm24456 | 3 | 106 | - | snRNA gene | predicted gene, 24456 | |
Tssr31554 | 3 | 50 | + | TSS region | transcription start site region 31554 | |
Gm15400 | 3 | 600 | + | pseudogene | predicted gene 15400 | |
n-TEctc1 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA glutamic acid 1 (anticodon CTC) | |
D3Dcr16 | 3 | 136 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 16 | ||
D3Mit199 | 3 | 133 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 199 | ||
Gm15399 | 3 | 1007 | - | pseudogene | predicted gene 15399 | |
Gm40144 | 3 | 21454 | + | lncRNA gene | predicted gene, 40144 | |
Gm43731 | 3 | 72747 | + | lincRNA gene | predicted gene 43731 | |
Gm9372 | 3 | 429 | + | pseudogene | predicted gene 9372 | |
Tssr35510 | 3 | 9 | - | TSS region | transcription start site region 35510 | |
Gm42824 | 3 | 246 | - | pseudogene | predicted gene 42824 | |
Cpgi13782 | 3 | 776 | CpG island | CpG island 13782 | ||
Tssr31555 | 3 | 82 | + | TSS region | transcription start site region 31555 | |
Tram1l1 | 3 | 2223 | + | protein coding gene | translocation associated membrane protein 1-like 1 | |
Tssr31556 | 3 | 11 | + | TSS region | transcription start site region 31556 | |
Tssr31557 | 3 | 13 | + | TSS region | transcription start site region 31557 | |
Gm4617 | 3 | 330 | + | pseudogene | predicted pseudogene 4617 |