Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:122438719-122719714

38 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Bcar3	3	122419780 to 122530191	110411	+	protein coding gene	breast cancer anti-estrogen resistance 3
Gm42836	3	122426443 to 122459060	32617	-	antisense lncRNA gene	predicted gene 42836
Gm25153	3	122464727 to 122464882	155	+	snRNA gene	predicted gene, 25153
Gm34349	3	122476461 to 122483094	6633	-	lncRNA gene	predicted gene, 34349
Tssr31499	3	122483771 to 122483794	23	+	TSS region	transcription start site region 31499
Tssr31500	3	122504659 to 122504666	7	+	TSS region	transcription start site region 31500
Cpgi13769	3	122508015 to 122508455	440		CpG island	CpG island 13769
Tssr31501	3	122510878 to 122510882	4	+	TSS region	transcription start site region 31501
Tssr31502	3	122511199 to 122511220	21	+	TSS region	transcription start site region 31502
Tssr31503	3	122511272 to 122511284	12	+	TSS region	transcription start site region 31503
Tssr31504	3	122511955 to 122511958	3	+	TSS region	transcription start site region 31504
Tssr31505	3	122512170 to 122512206	36	+	TSS region	transcription start site region 31505
Tssr35450	3	122512999 to 122513049	50	-	TSS region	transcription start site region 35450
Fnbp1l	3	122538719 to 122619714	80995	-	protein coding gene	formin binding protein 1-like
Tssr35451	3	122539544 to 122539549	5	-	TSS region	transcription start site region 35451
Mir7657	3	122541625 to 122541681	56	-	miRNA gene	microRNA 7657
Tssr35452	3	122551534 to 122551541	7	-	TSS region	transcription start site region 35452
Tssr35453	3	122552338 to 122552341	3	-	TSS region	transcription start site region 35453
Tssr35454	3	122559099 to 122559116	17	-	TSS region	transcription start site region 35454
Gm43569	3	122565050 to 122574740	9690	+	antisense lncRNA gene	predicted gene 43569
Tssr31506	3	122566719 to 122566739	20	+	TSS region	transcription start site region 31506
Tssr35455	3	122568785 to 122568808	23	-	TSS region	transcription start site region 35455
Tssr35456	3	122569710 to 122569749	39	-	TSS region	transcription start site region 35456
Gm42994	3	122574524 to 122577072	2548	-	unclassified gene	predicted gene 42994
Tssr35457	3	122590198 to 122590211	13	-	TSS region	transcription start site region 35457
Tssr35458	3	122612221 to 122612226	5	-	TSS region	transcription start site region 35458
Cpgi13770	3	122618384 to 122620364	1980		CpG island	CpG island 13770
Tssr35459	3	122619442 to 122619463	21	-	TSS region	transcription start site region 35459
Tssr35460	3	122619663 to 122619680	17	-	TSS region	transcription start site region 35460
Tssr35461	3	122619683 to 122619698	15	-	TSS region	transcription start site region 35461
Tssr35462	3	122619712 to 122619723	11	-	TSS region	transcription start site region 35462
Tssr35463	3	122619737 to 122619748	11	-	TSS region	transcription start site region 35463
Gm43568	3	122622255 to 122630168	7913	-	lincRNA gene	predicted gene 43568
Tssr35464	3	122629743 to 122629766	23	-	TSS region	transcription start site region 35464
Gm5981	3	122632785 to 122633271	486	-	pseudogene	predicted gene 5981
Gm40140	3	122662220 to 122684080	21860	-	lncRNA gene	predicted gene, 40140
Tssr31507	3	122690754 to 122690755	1	+	TSS region	transcription start site region 31507
D3Mit80	3	122693359 to 122693549	190		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 80