Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:122006988-122257002

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap29 3 121953072 to 122016157 63085 + protein coding gene Rho GTPase activating protein 29
Gm42544 3 122023830 to 122027071 3241 + unclassified gene predicted gene 42544
Tssr31469 3 122044428 to 122044469 41 + TSS region transcription start site region 31469
Abca4 3 122044443 to 122180123 135680 + protein coding gene ATP-binding cassette, sub-family A (ABC1), member 4
Tssr31470 3 122044471 to 122044491 20 + TSS region transcription start site region 31470
Tssr31471 3 122076925 to 122076970 45 + TSS region transcription start site region 31471
Tssr31472 3 122077148 to 122077159 11 + TSS region transcription start site region 31472
Tssr31473 3 122082621 to 122082627 6 + TSS region transcription start site region 31473
Gm40138 3 122105484 to 122131814 26330 - lncRNA gene predicted gene, 40138
Gm43158 3 122125106 to 122227370 102264 - pseudogene predicted gene 43158
Tssr31474 3 122131988 to 122132002 14 + TSS region transcription start site region 31474
Gm43157 3 122152208 to 122152619 411 - pseudogene predicted gene 43157
Tssr31475 3 122173738 to 122173756 18 + TSS region transcription start site region 31475
Tssr31476 3 122173758 to 122173772 14 + TSS region transcription start site region 31476
Gm9361 3 122183653 to 122184984 1331 - pseudogene predicted gene 9361
Tssr35441 3 122195084 to 122195087 3 - TSS region transcription start site region 35441
Gm46822 3 122197406 to 122245445 48039 - lncRNA gene predicted gene, 46822
D3Jor1 3 122203846 to 122204596 750 DNA segment DNA segment, Chr 3, Barbara Jordan 1
Tssr1038 3 122211144 to 122211193 49 - TSS region transcription start site region 1038
Gm40137 3 122211428 to 122215304 3876 + lncRNA gene predicted gene, 40137
Gm4609 3 122230195 to 122231196 1001 - pseudogene predicted gene 4609
Gm22903 3 122232535 to 122232636 101 - miRNA gene predicted gene, 22903
Tssr35442 3 122239792 to 122239803 11 - TSS region transcription start site region 35442
Tssr31477 3 122243103 to 122243129 26 + TSS region transcription start site region 31477
Cpgi13765 3 122245217 to 122246614 1397 CpG island CpG island 13765
Tssr35443 3 122245219 to 122245229 10 - TSS region transcription start site region 35443
Tssr35444 3 122245302 to 122245332 30 - TSS region transcription start site region 35444
Tssr31478 3 122245476 to 122245550 74 + TSS region transcription start site region 31478
Gclm 3 122245557 to 122267215 21658 + protein coding gene glutamate-cysteine ligase, modifier subunit
Tssr31479 3 122245563 to 122245578 15 + TSS region transcription start site region 31479
Tssr31480 3 122245581 to 122245608 27 + TSS region transcription start site region 31480
Tssr31481 3 122245610 to 122245622 12 + TSS region transcription start site region 31481
Tssr31482 3 122245625 to 122245722 97 + TSS region transcription start site region 31482
Tssr1039 3 122245743 to 122245744 1 + TSS region transcription start site region 1039
Tssr31483 3 122245776 to 122245829 53 + TSS region transcription start site region 31483
Tssr31484 3 122245910 to 122245921 11 + TSS region transcription start site region 31484
Gm17494 3 122255958 to 122293720 37762 - unclassified non-coding RNA gene predicted gene, 17494
Tssr31485 3 122256686 to 122256691 5 + TSS region transcription start site region 31485
Gm6061 3 122256728 to 122257219 491 + pseudogene predicted gene 6061