Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
tnyw | 3 | 21152164 | heritable phenotypic marker | tiny wasting | ||
Alg14 | 3 | 71321 | + | protein coding gene | asparagine-linked glycosylation 14 | |
Gm33310 | 3 | 7683 | + | lncRNA gene | predicted gene, 33310 | |
Gm33363 | 3 | 19682 | + | lncRNA gene | predicted gene, 33363 | |
Tssr31438 | 3 | 16 | + | TSS region | transcription start site region 31438 | |
Tssr31439 | 3 | 12 | + | TSS region | transcription start site region 31439 | |
Cpgi13757 | 3 | 157 | CpG island | CpG island 13757 | ||
Gm5711 | 3 | 420 | - | pseudogene | predicted gene 5711 | |
Tssr31440 | 3 | 6 | + | TSS region | transcription start site region 31440 | |
Gm40134 | 3 | 3476 | + | lncRNA gene | predicted gene, 40134 | |
Gm42928 | 3 | 3338 | - | unclassified gene | predicted gene 42928 | |
Cpgi13758 | 3 | 1829 | CpG island | CpG island 13758 | ||
Tssr31441 | 3 | 46 | + | TSS region | transcription start site region 31441 | |
Cnn3 | 3 | 31664 | + | protein coding gene | calponin 3, acidic | |
Tssr31442 | 3 | 7 | + | TSS region | transcription start site region 31442 | |
Tssr35415 | 3 | 18 | - | TSS region | transcription start site region 35415 | |
Gm42929 | 3 | 1285 | + | unclassified gene | predicted gene 42929 | |
Tssr31443 | 3 | 14 | + | TSS region | transcription start site region 31443 | |
Tssr31444 | 3 | 27 | + | TSS region | transcription start site region 31444 | |
Tssr31445 | 3 | 17 | + | TSS region | transcription start site region 31445 | |
Tssr1033 | 3 | 6 | + | TSS region | transcription start site region 1033 | |
Tssr31446 | 3 | 20 | + | TSS region | transcription start site region 31446 | |
Slc44a3 | 3 | 72816 | - | protein coding gene | solute carrier family 44, member 3 | |
D3Mit42 | 3 | 152 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 42 | ||
D3Mit43 | 3 | 122 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 43 | ||
Tssr35416 | 3 | 11 | - | TSS region | transcription start site region 35416 | |
Tssr31447 | 3 | 8 | + | TSS region | transcription start site region 31447 | |
Gm38684 | 3 | 1495 | + | lncRNA gene | predicted gene, 38684 | |
Tssr31448 | 3 | 9 | + | TSS region | transcription start site region 31448 | |
Tssr31449 | 3 | 31 | + | TSS region | transcription start site region 31449 | |
Tssr31450 | 3 | 25 | + | TSS region | transcription start site region 31450 | |
Cpgi13759 | 3 | 424 | CpG island | CpG island 13759 | ||
Tssr35417 | 3 | 11 | - | TSS region | transcription start site region 35417 | |
Tssr35418 | 3 | 29 | - | TSS region | transcription start site region 35418 | |
Tssr35419 | 3 | 70 | - | TSS region | transcription start site region 35419 | |
Tssr31451 | 3 | 12 | + | TSS region | transcription start site region 31451 | |
A530020G20Rik | 3 | 3263 | + | antisense lncRNA gene | RIKEN cDNA A530020G20 gene | |
Gm40135 | 3 | 17462 | + | lncRNA gene | predicted gene, 40135 | |
Tssr1034 | 3 | 5 | - | TSS region | transcription start site region 1034 | |
Tssr35420 | 3 | 5 | - | TSS region | transcription start site region 35420 | |
Tssr35421 | 3 | 9 | - | TSS region | transcription start site region 35421 | |
Tssr35422 | 3 | 2 | - | TSS region | transcription start site region 35422 | |
Tssr35423 | 3 | 11 | - | TSS region | transcription start site region 35423 | |
Gm33547 | 3 | 12011 | - | lncRNA gene | predicted gene, 33547 | |
Tssr1035 | 3 | 14 | + | TSS region | transcription start site region 1035 | |
Tssr35424 | 3 | 10 | - | TSS region | transcription start site region 35424 | |
Tssr31452 | 3 | 23 | + | TSS region | transcription start site region 31452 | |
Tssr1036 | 3 | 14 | + | TSS region | transcription start site region 1036 | |
Gm33485 | 3 | 26129 | - | lncRNA gene | predicted gene, 33485 | |
Tssr1037 | 3 | 12 | - | TSS region | transcription start site region 1037 | |
Gm33708 | 3 | 2170 | + | lncRNA gene | predicted gene, 33708 | |
D3Mit251 | 3 | 131 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 251 | ||
Tssr35425 | 3 | 8 | - | TSS region | transcription start site region 35425 | |
A730020M07Rik | 3 | 8549 | - | lincRNA gene | RIKEN cDNA A730020M07 gene | |
4930432M17Rik | 3 | 12219 | + | protein coding gene | RIKEN cDNA 4930432M17 gene | |
Gm43608 | 3 | 8745 | - | lincRNA gene | predicted gene 43608 | |
D3Mit288 | 3 | 83 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 288 | ||
Gm43607 | 3 | 817 | - | lincRNA gene | predicted gene 43607 | |
Gm40136 | 3 | 6837 | - | lncRNA gene | predicted gene, 40136 | |
Gm43823 | 3 | 1807 | - | unclassified gene | predicted gene 43823 | |
Cpgi13760 | 3 | 1350 | CpG island | CpG island 13760 | ||
Tssr35426 | 3 | 14 | - | TSS region | transcription start site region 35426 | |
Tssr31453 | 3 | 19 | + | TSS region | transcription start site region 31453 | |
F3 | 3 | 11511 | + | protein coding gene | coagulation factor III | |
Tssr31454 | 3 | 5 | + | TSS region | transcription start site region 31454 | |
Tssr31455 | 3 | 5 | + | TSS region | transcription start site region 31455 | |
Tssr31456 | 3 | 17 | + | TSS region | transcription start site region 31456 | |
Tssr31457 | 3 | 15 | + | TSS region | transcription start site region 31457 | |
Cpgi13761 | 3 | 151 | CpG island | CpG island 13761 | ||
Tssr31458 | 3 | 8 | + | TSS region | transcription start site region 31458 | |
Tssr31459 | 3 | 6 | + | TSS region | transcription start site region 31459 | |
Gm42777 | 3 | 3602 | - | unclassified gene | predicted gene 42777 | |
Tssr35427 | 3 | 11 | - | TSS region | transcription start site region 35427 | |
Abcd3 | 3 | 56311 | - | protein coding gene | ATP-binding cassette, sub-family D (ALD), member 3 | |
Gm43609 | 3 | 2711 | - | unclassified gene | predicted gene 43609 | |
4633401B06Rik | 3 | 1072 | - | unclassified gene | RIKEN cDNA 4633401B06 gene | |
Tssr35428 | 3 | 6 | - | TSS region | transcription start site region 35428 | |
Tssr35429 | 3 | 23 | - | TSS region | transcription start site region 35429 | |
Cpgi13762 | 3 | 1107 | CpG island | CpG island 13762 | ||
Tssr35430 | 3 | 22 | - | TSS region | transcription start site region 35430 | |
Tssr35431 | 3 | 32 | - | TSS region | transcription start site region 35431 | |
Tssr35432 | 3 | 16 | - | TSS region | transcription start site region 35432 | |
Tssr35433 | 3 | 49 | - | TSS region | transcription start site region 35433 | |
Tssr35434 | 3 | 13 | - | TSS region | transcription start site region 35434 | |
Tssr35435 | 3 | 91 | - | TSS region | transcription start site region 35435 | |
D3Mit347 | 3 | 105 | DNA segment | DNA Segment, Chr 3 Massachusetts Institute of Technology 347 | ||
Gm42776 | 3 | 405 | - | pseudogene | predicted gene 42776 | |
Tssr31460 | 3 | 3 | + | TSS region | transcription start site region 31460 | |
D3Mit317 | 3 | 123 | DNA segment | DNA Segment, Chr 3, Massachusetts Institute of Technology 317 | ||
Tssr35436 | 3 | 8 | - | TSS region | transcription start site region 35436 | |
Gm33924 | 3 | 1059 | - | lncRNA gene | predicted gene, 33924 | |
Tssr35437 | 3 | 4 | - | TSS region | transcription start site region 35437 | |
Tssr35438 | 3 | 28 | - | TSS region | transcription start site region 35438 | |
Tssr35439 | 3 | 9 | - | TSS region | transcription start site region 35439 | |
Gm33987 | 3 | 4039 | + | lncRNA gene | predicted gene, 33987 | |
Tssr31461 | 3 | 13 | + | TSS region | transcription start site region 31461 | |
Gm42593 | 3 | 376 | + | pseudogene | predicted gene 42593 | |
Tssr31462 | 3 | 7 | + | TSS region | transcription start site region 31462 | |
Gm34050 | 3 | 7311 | - | lncRNA gene | predicted gene, 34050 | |
Tssr35440 | 3 | 28 | - | TSS region | transcription start site region 35440 | |
Gm34119 | 3 | 32256 | + | lncRNA gene | predicted gene, 34119 | |
Gm46821 | 3 | 9614 | - | lncRNA gene | predicted gene, 46821 | |
Cpgi13763 | 3 | 1096 | CpG island | CpG island 13763 | ||
Arhgap29 | 3 | 63085 | + | protein coding gene | Rho GTPase activating protein 29 | |
Tssr31463 | 3 | 13 | + | TSS region | transcription start site region 31463 | |
Tssr31464 | 3 | 82 | + | TSS region | transcription start site region 31464 | |
Tssr31465 | 3 | 19 | + | TSS region | transcription start site region 31465 | |
Cpgi13764 | 3 | 375 | CpG island | CpG island 13764 | ||
Tssr31466 | 3 | 16 | + | TSS region | transcription start site region 31466 | |
Tssr31467 | 3 | 4 | + | TSS region | transcription start site region 31467 | |
Tssr31468 | 3 | 13 | + | TSS region | transcription start site region 31468 | |
Gm42544 | 3 | 3241 | + | unclassified gene | predicted gene 42544 | |
Tssr31469 | 3 | 41 | + | TSS region | transcription start site region 31469 | |
Abca4 | 3 | 135680 | + | protein coding gene | ATP-binding cassette, sub-family A (ABC1), member 4 | |
Tssr31470 | 3 | 20 | + | TSS region | transcription start site region 31470 | |
Tssr31471 | 3 | 45 | + | TSS region | transcription start site region 31471 | |
Tssr31472 | 3 | 11 | + | TSS region | transcription start site region 31472 | |
Tssr31473 | 3 | 6 | + | TSS region | transcription start site region 31473 | |
Gm40138 | 3 | 26330 | - | lncRNA gene | predicted gene, 40138 | |
Gm43158 | 3 | 102264 | - | pseudogene | predicted gene 43158 | |
Tssr31474 | 3 | 14 | + | TSS region | transcription start site region 31474 | |
Gm43157 | 3 | 411 | - | pseudogene | predicted gene 43157 | |
Tssr31475 | 3 | 18 | + | TSS region | transcription start site region 31475 | |
Tssr31476 | 3 | 14 | + | TSS region | transcription start site region 31476 | |
Gm9361 | 3 | 1331 | - | pseudogene | predicted gene 9361 | |
Tssr35441 | 3 | 3 | - | TSS region | transcription start site region 35441 | |
Gm46822 | 3 | 48039 | - | lncRNA gene | predicted gene, 46822 | |
D3Jor1 | 3 | 750 | DNA segment | DNA segment, Chr 3, Barbara Jordan 1 | ||
Tssr1038 | 3 | 49 | - | TSS region | transcription start site region 1038 | |
Gm40137 | 3 | 3876 | + | lncRNA gene | predicted gene, 40137 | |
Gm4609 | 3 | 1001 | - | pseudogene | predicted gene 4609 | |
Gm22903 | 3 | 101 | - | miRNA gene | predicted gene, 22903 | |
Tssr35442 | 3 | 11 | - | TSS region | transcription start site region 35442 | |
Tssr31477 | 3 | 26 | + | TSS region | transcription start site region 31477 | |
Cpgi13765 | 3 | 1397 | CpG island | CpG island 13765 | ||
Tssr35443 | 3 | 10 | - | TSS region | transcription start site region 35443 | |
Tssr35444 | 3 | 30 | - | TSS region | transcription start site region 35444 | |
Tssr31478 | 3 | 74 | + | TSS region | transcription start site region 31478 | |
Gclm | 3 | 21658 | + | protein coding gene | glutamate-cysteine ligase, modifier subunit | |
Tssr31479 | 3 | 15 | + | TSS region | transcription start site region 31479 | |
Tssr31480 | 3 | 27 | + | TSS region | transcription start site region 31480 | |
Tssr31481 | 3 | 12 | + | TSS region | transcription start site region 31481 | |
Tssr31482 | 3 | 97 | + | TSS region | transcription start site region 31482 | |
Tssr1039 | 3 | 1 | + | TSS region | transcription start site region 1039 | |
Tssr31483 | 3 | 53 | + | TSS region | transcription start site region 31483 | |
Tssr31484 | 3 | 11 | + | TSS region | transcription start site region 31484 | |
Gm17494 | 3 | 37762 | - | unclassified non-coding RNA gene | predicted gene, 17494 | |
Tssr31485 | 3 | 5 | + | TSS region | transcription start site region 31485 | |
Gm6061 | 3 | 491 | + | pseudogene | predicted gene 6061 | |
Tssr31486 | 3 | 2 | + | TSS region | transcription start site region 31486 | |
Tssr31487 | 3 | 10 | + | TSS region | transcription start site region 31487 | |
Tssr31488 | 3 | 40 | + | TSS region | transcription start site region 31488 | |
Tssr31489 | 3 | 24 | + | TSS region | transcription start site region 31489 | |
Tssr31490 | 3 | 48 | + | TSS region | transcription start site region 31490 | |
Cpgi13766 | 3 | 845 | CpG island | CpG island 13766 | ||
Tssr31491 | 3 | 44 | + | TSS region | transcription start site region 31491 | |
Dnttip2 | 3 | 10857 | + | protein coding gene | deoxynucleotidyltransferase, terminal, interacting protein 2 | |
Tssr31492 | 3 | 27 | + | TSS region | transcription start site region 31492 | |
Cpgi13767 | 3 | 1657 | CpG island | CpG island 13767 | ||
n-TRtct2 | 3 | 84 | - | tRNA gene | nuclear encoded tRNA arginine 2 (anticodon TCT) | |
Gm40190 | 3 | 10174 | + | lincRNA gene | predicted gene, 40190 | |
Mir760 | 3 | 118 | - | miRNA gene | microRNA 760 | |
Tssr31493 | 3 | 10 | + | TSS region | transcription start site region 31493 | |
Gm40139 | 3 | 9996 | + | lncRNA gene | predicted gene, 40139 | |
Tssr35445 | 3 | 40 | - | TSS region | transcription start site region 35445 | |
Gm4610 | 3 | 14714 | - | antisense lncRNA gene | predicted gene 4610 | |
Tssr35446 | 3 | 40 | - | TSS region | transcription start site region 35446 | |
Tssr35447 | 3 | 20 | - | TSS region | transcription start site region 35447 | |
Tssr35448 | 3 | 5 | - | TSS region | transcription start site region 35448 | |
Cfq3 | 3 | 5031205 | QTL | conditioned fear QTL 3 | ||
Tssr35449 | 3 | 17 | - | TSS region | transcription start site region 35449 | |
Cpgi13768 | 3 | 1050 | CpG island | CpG island 13768 | ||
Tssr31494 | 3 | 15 | + | TSS region | transcription start site region 31494 | |
Tssr31495 | 3 | 15 | + | TSS region | transcription start site region 31495 | |
Bcar3 | 3 | 110411 | + | protein coding gene | breast cancer anti-estrogen resistance 3 | |
Tssr31496 | 3 | 13 | + | TSS region | transcription start site region 31496 | |
Tssr31497 | 3 | 6 | + | TSS region | transcription start site region 31497 | |
Tssr31498 | 3 | 15 | + | TSS region | transcription start site region 31498 | |
Gm42836 | 3 | 32617 | - | antisense lncRNA gene | predicted gene 42836 | |
Gm25153 | 3 | 155 | + | snRNA gene | predicted gene, 25153 | |
Gm34349 | 3 | 6633 | - | lncRNA gene | predicted gene, 34349 | |
Tssr31499 | 3 | 23 | + | TSS region | transcription start site region 31499 | |
Tssr31500 | 3 | 7 | + | TSS region | transcription start site region 31500 | |
Cpgi13769 | 3 | 440 | CpG island | CpG island 13769 | ||
Tssr31501 | 3 | 4 | + | TSS region | transcription start site region 31501 | |
Tssr31502 | 3 | 21 | + | TSS region | transcription start site region 31502 | |
Tssr31503 | 3 | 12 | + | TSS region | transcription start site region 31503 | |
Tssr31504 | 3 | 3 | + | TSS region | transcription start site region 31504 | |
Tssr31505 | 3 | 36 | + | TSS region | transcription start site region 31505 | |
Tssr35450 | 3 | 50 | - | TSS region | transcription start site region 35450 | |
Fnbp1l | 3 | 80995 | - | protein coding gene | formin binding protein 1-like | |
Tssr35451 | 3 | 5 | - | TSS region | transcription start site region 35451 | |
Mir7657 | 3 | 56 | - | miRNA gene | microRNA 7657 | |
Tssr35452 | 3 | 7 | - | TSS region | transcription start site region 35452 | |
Tssr35453 | 3 | 3 | - | TSS region | transcription start site region 35453 |