Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:117330491-117820507

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plppr4 3 117319145 to 117360876 41731 - protein coding gene phospholipid phosphatase related 4
Tssr35376 3 117358369 to 117358373 4 - TSS region transcription start site region 35376
Cpgi13745 3 117359875 to 117360460 585 CpG island CpG island 13745
Tssr35377 3 117360164 to 117360227 63 - TSS region transcription start site region 35377
Tssr35378 3 117360370 to 117360441 71 - TSS region transcription start site region 35378
Tssr35379 3 117360445 to 117360465 20 - TSS region transcription start site region 35379
D3Mit299.1 3 117431918 to 117432032 114 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 299.1
D3Mit299 3 117432041 to 117432153 112 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 299
Tssr1029 3 117574834 to 117574858 24 + TSS region transcription start site region 1029
Plppr5 3 117574836 to 117689507 114671 + protein coding gene phospholipid phosphatase related 5
Cpgi13746 3 117574843 to 117576049 1206 CpG island CpG island 13746
Tssr31397 3 117574882 to 117574905 23 + TSS region transcription start site region 31397
Tssr31398 3 117575228 to 117575239 11 + TSS region transcription start site region 31398
Tssr31399 3 117575268 to 117575282 14 + TSS region transcription start site region 31399
Tssr31400 3 117575491 to 117575507 16 + TSS region transcription start site region 31400
Tssr31401 3 117575519 to 117575534 15 + TSS region transcription start site region 31401
Tssr31402 3 117634240 to 117634243 3 + TSS region transcription start site region 31402
D3Mit250 3 117668722 to 117668872 150 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 250
Snx7 3 117781647 to 117868936 87289 - protein coding gene sorting nexin 7
Tssr31403 3 117786659 to 117786667 8 + TSS region transcription start site region 31403
Tssr35380 3 117804805 to 117804809 4 - TSS region transcription start site region 35380