Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:116817820-116907824

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43520 3 116818815 to 116818978 163 + unclassified gene predicted gene 43520
Gm43521 3 116822294 to 116822548 254 - unclassified gene predicted gene 43521
Gm40127 3 116823005 to 116829790 6785 + lncRNA gene predicted gene, 40127
Tssr31366 3 116829526 to 116829544 18 + TSS region transcription start site region 31366
Gm40128 3 116835357 to 116841513 6156 - lncRNA gene predicted gene, 40128
Tssr31367 3 116844543 to 116844547 4 + TSS region transcription start site region 31367
Gm29736 3 116844579 to 116844958 379 + pseudogene predicted gene, 29736
Tssr31368 3 116845145 to 116845163 18 + TSS region transcription start site region 31368
Gm43542 3 116846946 to 116847324 378 + pseudogene predicted gene 43542
Tssr31369 3 116859557 to 116859568 11 + TSS region transcription start site region 31369
Frrs1 3 116859567 to 116907714 48147 + protein coding gene ferric-chelate reductase 1
Tssr31370 3 116859574 to 116859591 17 + TSS region transcription start site region 31370
Tssr31371 3 116859593 to 116859605 12 + TSS region transcription start site region 31371
Cpgi13741 3 116861597 to 116861893 296 CpG island CpG island 13741
Tssr31372 3 116861641 to 116861695 54 + TSS region transcription start site region 31372
Tssr35358 3 116861810 to 116861821 11 - TSS region transcription start site region 35358
Tssr35359 3 116861825 to 116861849 24 - TSS region transcription start site region 35359
Tssr31373 3 116861910 to 116861928 18 + TSS region transcription start site region 31373
Tssr31374 3 116862820 to 116862824 4 + TSS region transcription start site region 31374
Tssr31375 3 116865621 to 116865638 17 + TSS region transcription start site region 31375
Tssr31376 3 116866165 to 116866202 37 + TSS region transcription start site region 31376
9030201C23Rik 3 116869470 to 116870833 1363 unclassified gene RIKEN cDNA 9030201C23 gene
Tssr31377 3 116870433 to 116870446 13 + TSS region transcription start site region 31377
Tssr31378 3 116878497 to 116878527 30 + TSS region transcription start site region 31378
Tssr31379 3 116885827 to 116885840 13 + TSS region transcription start site region 31379
Tssr31380 3 116885958 to 116885990 32 + TSS region transcription start site region 31380
Tssr31381 3 116886130 to 116886145 15 + TSS region transcription start site region 31381
Tssr31382 3 116886171 to 116886183 12 + TSS region transcription start site region 31382
Tssr31383 3 116886206 to 116886213 7 + TSS region transcription start site region 31383
Tssr31384 3 116890638 to 116890643 5 + TSS region transcription start site region 31384
Tssr31385 3 116890866 to 116890908 42 + TSS region transcription start site region 31385
Tssr31386 3 116894892 to 116894897 5 + TSS region transcription start site region 31386
Tssr31387 3 116899671 to 116899687 16 + TSS region transcription start site region 31387
Tssr31388 3 116899802 to 116899822 20 + TSS region transcription start site region 31388
Tssr31389 3 116899837 to 116899859 22 + TSS region transcription start site region 31389
Tssr31390 3 116899874 to 116899938 64 + TSS region transcription start site region 31390
Tssr31391 3 116903577 to 116903606 29 + TSS region transcription start site region 31391
Tssr31392 3 116903663 to 116903688 25 + TSS region transcription start site region 31392
Tssr31393 3 116903697 to 116903715 18 + TSS region transcription start site region 31393
Tssr31394 3 116903719 to 116903752 33 + TSS region transcription start site region 31394
Tssr31395 3 116904364 to 116904398 34 + TSS region transcription start site region 31395
Cpgi13742 3 116906123 to 116906332 209 CpG island CpG island 13742
Tssr31396 3 116906373 to 116906378 5 + TSS region transcription start site region 31396