Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:116777294-116867548

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Agl 3 116739999 to 116808166 68167 - protein coding gene amylo-1,6-glucosidase, 4-alpha-glucanotransferase
D3Mit314 3 116782995 to 116783194 199 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 314
Tssr35340 3 116804471 to 116804474 3 - TSS region transcription start site region 35340
Tssr35341 3 116807688 to 116807693 5 - TSS region transcription start site region 35341
Tssr35342 3 116807706 to 116807711 5 - TSS region transcription start site region 35342
Cpgi13740 3 116807724 to 116808695 971 CpG island CpG island 13740
Tssr35343 3 116807727 to 116807730 3 - TSS region transcription start site region 35343
Tssr35344 3 116807733 to 116807755 22 - TSS region transcription start site region 35344
Tssr35345 3 116807763 to 116807779 16 - TSS region transcription start site region 35345
Tssr35346 3 116807782 to 116807789 7 - TSS region transcription start site region 35346
Tssr35347 3 116807802 to 116807866 64 - TSS region transcription start site region 35347
Tssr35348 3 116807880 to 116807889 9 - TSS region transcription start site region 35348
Tssr35349 3 116807903 to 116807914 11 - TSS region transcription start site region 35349
Tssr35350 3 116807933 to 116807961 28 - TSS region transcription start site region 35350
Tssr35351 3 116807969 to 116807976 7 - TSS region transcription start site region 35351
Tssr35352 3 116807982 to 116807998 16 - TSS region transcription start site region 35352
Tssr35353 3 116808051 to 116808061 10 - TSS region transcription start site region 35353
Tssr35354 3 116808067 to 116808136 69 - TSS region transcription start site region 35354
Tssr35355 3 116808137 to 116808148 11 - TSS region transcription start site region 35355
Tssr35356 3 116808178 to 116808198 20 - TSS region transcription start site region 35356
Tssr35357 3 116808218 to 116808268 50 - TSS region transcription start site region 35357
Tssr31365 3 116808262 to 116808285 23 + TSS region transcription start site region 31365
Gm43520 3 116818815 to 116818978 163 + unclassified gene predicted gene 43520
Gm43521 3 116822294 to 116822548 254 - unclassified gene predicted gene 43521
Gm40127 3 116823005 to 116829790 6785 + lncRNA gene predicted gene, 40127
Tssr31366 3 116829526 to 116829544 18 + TSS region transcription start site region 31366
Gm40128 3 116835357 to 116841513 6156 - lncRNA gene predicted gene, 40128
Tssr31367 3 116844543 to 116844547 4 + TSS region transcription start site region 31367
Gm29736 3 116844579 to 116844958 379 + pseudogene predicted gene, 29736
Tssr31368 3 116845145 to 116845163 18 + TSS region transcription start site region 31368
Gm43542 3 116846946 to 116847324 378 + pseudogene predicted gene 43542
Tssr31369 3 116859557 to 116859568 11 + TSS region transcription start site region 31369
Frrs1 3 116859567 to 116907714 48147 + protein coding gene ferric-chelate reductase 1
Tssr31370 3 116859574 to 116859591 17 + TSS region transcription start site region 31370
Tssr31371 3 116859593 to 116859605 12 + TSS region transcription start site region 31371
Cpgi13741 3 116861597 to 116861893 296 CpG island CpG island 13741
Tssr31372 3 116861641 to 116861695 54 + TSS region transcription start site region 31372
Tssr35358 3 116861810 to 116861821 11 - TSS region transcription start site region 35358
Tssr35359 3 116861825 to 116861849 24 - TSS region transcription start site region 35359
Tssr31373 3 116861910 to 116861928 18 + TSS region transcription start site region 31373
Tssr31374 3 116862820 to 116862824 4 + TSS region transcription start site region 31374
Tssr31375 3 116865621 to 116865638 17 + TSS region transcription start site region 31375
Tssr31376 3 116866165 to 116866202 37 + TSS region transcription start site region 31376