Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:116010020-116229688

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Extl2	3	116007462 to 116029017	21555	+	protein coding gene	exostoses (multiple)-like 2
Gm26344	3	116065788 to 116065919	131	-	snoRNA gene	predicted gene, 26344
Gm31384	3	116093593 to 116102373	8780	+	lncRNA gene	predicted gene, 31384
Vcam1	3	116110020 to 116129688	19668	-	protein coding gene	vascular cell adhesion molecule 1
Tssr35296	3	116114556 to 116114569	13	-	TSS region	transcription start site region 35296
Gm43109	3	116128451 to 116141016	12565	+	antisense lncRNA gene	predicted gene 43109
Tssr35297	3	116129375 to 116129387	12	-	TSS region	transcription start site region 35297
Tssr35298	3	116129449 to 116129464	15	-	TSS region	transcription start site region 35298
Tssr35299	3	116129615 to 116129624	9	-	TSS region	transcription start site region 35299
Tbs1	3	116130456 to 116130601	145		QTL	tuberculosis severity 1
D3Mit215	3	116130456 to 116130601	145		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 215
5330425B07Rik	3	116148110 to 116149136	1026	+	lncRNA gene	RIKEN cDNA 5330425B07 gene
Gm26544	3	116150479 to 116165821	15342	+	lincRNA gene	predicted gene, 26544
D3Mit346	3	116157389 to 116157514	125		DNA segment	DNA Segment, Chr 3 Massachusetts Institute of Technology 346
gro57	3	116157514 to 96641414	-19516100		heritable phenotypic marker	growth/size 57
hem6	3	116157514 to 96641414	-19516100		heritable phenotypic marker	haematopoietic 6
Tssr31351	3	116184668 to 116184680	12	+	TSS region	transcription start site region 31351
Gm31651	3	116200408 to 116202713	2305	+	lincRNA gene	predicted gene, 31651