Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:115863809-115964063

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A930005H10Rik 3 115881581 to 115888130 6549 - lncRNA gene RIKEN cDNA A930005H10 gene
Tssr31338 3 115885805 to 115885815 10 + TSS region transcription start site region 31338
Cpgi13726 3 115887759 to 115888531 772 CpG island CpG island 13726
Tssr31339 3 115887871 to 115887882 11 + TSS region transcription start site region 31339
Tssr35285 3 115887879 to 115887891 12 - TSS region transcription start site region 35285
Tssr35286 3 115888001 to 115888012 11 - TSS region transcription start site region 35286
Tssr35287 3 115888037 to 115888054 17 - TSS region transcription start site region 35287
Tssr35288 3 115888055 to 115888082 27 - TSS region transcription start site region 35288
Tssr35289 3 115888086 to 115888137 51 - TSS region transcription start site region 35289
Tssr31340 3 115888098 to 115888103 5 + TSS region transcription start site region 31340
Tssr31341 3 115888139 to 115888200 61 + TSS region transcription start site region 31341
Dph5 3 115888165 to 115929323 41158 + protein coding gene diphthamide biosynthesis 5
Tssr31342 3 115888208 to 115888233 25 + TSS region transcription start site region 31342
Tssr31343 3 115888242 to 115888250 8 + TSS region transcription start site region 31343
A230060L02Rik 3 115889260 to 115892274 3014 unclassified gene RIKEN cDNA A230060L02 gene
Gm42687 3 115910370 to 115910533 163 + unclassified gene predicted gene 42687
Gm43107 3 115913809 to 115914063 254 - unclassified gene predicted gene 43107
Gm43108 3 115913890 to 115914182 292 + unclassified gene predicted gene 43108
Tssr35290 3 115933704 to 115933707 3 - TSS region transcription start site region 35290
Slc30a7 3 115938973 to 116007406 68433 - protein coding gene solute carrier family 30 (zinc transporter), member 7
Gm43106 3 115942482 to 115943118 636 + pseudogene predicted gene 43106
Gm6649 3 115943103 to 115944264 1161 + pseudogene predicted gene 6649