Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:114341025-115821036

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D3Mit107 3 114415624 to 114415820 196 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 107
Gm43749 3 114544421 to 114544772 351 - pseudogene predicted gene 43749
Gm23750 3 114824154 to 114824285 131 - snoRNA gene predicted gene, 23750
Tssr31319 3 114827648 to 114827651 3 + TSS region transcription start site region 31319
Gm19147 3 114828019 to 114828642 623 - pseudogene predicted gene, 19147
Tssr31320 3 114904062 to 114904142 80 + TSS region transcription start site region 31320
Olfm3 3 114904078 to 115125722 221644 + protein coding gene olfactomedin 3
Cpgi13723 3 114904167 to 114904514 347 CpG island CpG island 13723
Tssr31321 3 114904213 to 114904224 11 + TSS region transcription start site region 31321
Tssr31322 3 114904238 to 114904265 27 + TSS region transcription start site region 31322
Tssr31323 3 114904266 to 114904291 25 + TSS region transcription start site region 31323
Tssr31324 3 114904352 to 114904381 29 + TSS region transcription start site region 31324
Tssr31325 3 114904468 to 114904480 12 + TSS region transcription start site region 31325
Tssr31326 3 114913613 to 114913616 3 + TSS region transcription start site region 31326
Tssr31327 3 115081025 to 115081036 11 + TSS region transcription start site region 31327
Gm18429 3 115171629 to 115172049 420 - pseudogene predicted gene, 18429
D3Nds5 3 115268161 to 115268307 146 DNA segment DNA segment, Chr 3, Nuffield Department of Surgery 5
Tssr31328 3 115384541 to 115384542 1 + TSS region transcription start site region 31328
Gm22337 3 115391554 to 115391685 131 + snoRNA gene predicted gene, 22337
Gm25347 3 115484016 to 115484136 120 - miRNA gene predicted gene, 25347
Tssr35263 3 115497475 to 115497477 2 - TSS region transcription start site region 35263
Gm43669 3 115518576 to 115519011 435 + pseudogene predicted gene 43669
Gm40124 3 115636693 to 115641726 5033 - lncRNA gene predicted gene, 40124
Tssr35264 3 115641510 to 115641531 21 - TSS region transcription start site region 35264
Tssr35265 3 115641543 to 115641554 11 - TSS region transcription start site region 35265
Tssr35266 3 115669393 to 115669424 31 - TSS region transcription start site region 35266
Tssr31329 3 115674019 to 115674032 13 + TSS region transcription start site region 31329
Tssr31330 3 115674069 to 115674077 8 + TSS region transcription start site region 31330
Tssr35267 3 115682681 to 115682693 12 - TSS region transcription start site region 35267
Tssr31331 3 115683143 to 115683170 27 + TSS region transcription start site region 31331
S1pr1 3 115710433 to 115715055 4622 - protein coding gene sphingosine-1-phosphate receptor 1
Tssr35268 3 115711037 to 115711048 11 - TSS region transcription start site region 35268
Tssr35269 3 115711174 to 115711185 11 - TSS region transcription start site region 35269
Tssr35270 3 115711186 to 115711198 12 - TSS region transcription start site region 35270
Tssr35271 3 115711209 to 115711245 36 - TSS region transcription start site region 35271
Tssr35272 3 115711264 to 115711281 17 - TSS region transcription start site region 35272
Cpgi13724 3 115712220 to 115712551 331 CpG island CpG island 13724
Tssr35273 3 115712539 to 115712554 15 - TSS region transcription start site region 35273
Tssr35274 3 115712603 to 115712613 10 - TSS region transcription start site region 35274
Tssr35275 3 115712855 to 115712867 12 - TSS region transcription start site region 35275
Tssr35276 3 115713717 to 115713747 30 - TSS region transcription start site region 35276
Tssr35277 3 115713793 to 115713806 13 - TSS region transcription start site region 35277
Cpgi13725 3 115714644 to 115715548 904 CpG island CpG island 13725
Tssr35278 3 115714780 to 115714797 17 - TSS region transcription start site region 35278
Tssr35279 3 115714802 to 115714813 11 - TSS region transcription start site region 35279
Tssr35280 3 115714854 to 115714863 9 - TSS region transcription start site region 35280
Tssr35281 3 115714889 to 115714919 30 - TSS region transcription start site region 35281
Tssr35282 3 115714933 to 115714947 14 - TSS region transcription start site region 35282
Tssr35283 3 115715031 to 115715062 31 - TSS region transcription start site region 35283
Gm9889 3 115715150 to 115716728 1578 + lincRNA gene predicted gene 9889
Tssr31332 3 115715156 to 115715172 16 + TSS region transcription start site region 31332
Tssr1027 3 115774232 to 115774237 5 + TSS region transcription start site region 1027
Tssr31333 3 115799534 to 115799545 11 + TSS region transcription start site region 31333
Tssr31334 3 115801084 to 115801099 15 + TSS region transcription start site region 31334
Tssr31335 3 115801112 to 115801120 8 + TSS region transcription start site region 31335
Tssr35284 3 115801156 to 115801171 15 - TSS region transcription start site region 35284
Tssr31336 3 115801809 to 115801823 14 + TSS region transcription start site region 31336
Tssr31337 3 115815844 to 115815891 47 + TSS region transcription start site region 31337