Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:113910624-114920820

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr1026 3 114030473 to 114030480 7 + TSS region transcription start site region 1026
Tssr31311 3 114030484 to 114030493 9 + TSS region transcription start site region 31311
Tssr31312 3 114030532 to 114030571 39 + TSS region transcription start site region 31312
Col11a1 3 114030540 to 114220718 190178 + protein coding gene collagen, type XI, alpha 1
Tssr31313 3 114030584 to 114030638 54 + TSS region transcription start site region 31313
Cpgi13722 3 114030645 to 114030922 277 CpG island CpG island 13722
Tssr31314 3 114030779 to 114030833 54 + TSS region transcription start site region 31314
Tssr31315 3 114030836 to 114030865 29 + TSS region transcription start site region 31315
Tssr31316 3 114030866 to 114030880 14 + TSS region transcription start site region 31316
Tssr31317 3 114094558 to 114094580 22 + TSS region transcription start site region 31317
Tssr31318 3 114118012 to 114118013 1 + TSS region transcription start site region 31318
D3Mit107 3 114415624 to 114415820 196 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 107
Gm43749 3 114544421 to 114544772 351 - pseudogene predicted gene 43749
Gm23750 3 114824154 to 114824285 131 - snoRNA gene predicted gene, 23750
Tssr31319 3 114827648 to 114827651 3 + TSS region transcription start site region 31319
Gm19147 3 114828019 to 114828642 623 - pseudogene predicted gene, 19147
Tssr31320 3 114904062 to 114904142 80 + TSS region transcription start site region 31320
Olfm3 3 114904078 to 115125722 221644 + protein coding gene olfactomedin 3
Cpgi13723 3 114904167 to 114904514 347 CpG island CpG island 13723
Tssr31321 3 114904213 to 114904224 11 + TSS region transcription start site region 31321
Tssr31322 3 114904238 to 114904265 27 + TSS region transcription start site region 31322
Tssr31323 3 114904266 to 114904291 25 + TSS region transcription start site region 31323
Tssr31324 3 114904352 to 114904381 29 + TSS region transcription start site region 31324
Tssr31325 3 114904468 to 114904480 12 + TSS region transcription start site region 31325
Tssr31326 3 114913613 to 114913616 3 + TSS region transcription start site region 31326