Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:11326465-13717489

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm8919 3 11658497 to 11659510 1013 - pseudogene predicted gene 8919
Gm10745 3 11823229 to 11844359 21130 - lincRNA gene predicted gene 10745
Tssr32630 3 11904909 to 11904924 15 - TSS region transcription start site region 32630
Tssr820 3 12155268 to 12155287 19 + TSS region transcription start site region 820
Gm37996 3 12384243 to 12384609 366 - pseudogene predicted gene, 37996
Gm18431 3 12521465 to 12522489 1024 + pseudogene predicted gene, 18431
Gm2429 3 12631260 to 12631845 585 + pseudogene predicted gene 2429
D3Mit90 3 12683956 to 12684099 143 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 90
Gm18232 3 12829051 to 12831568 2517 + pseudogene predicted gene, 18232
Tssr28376 3 12855785 to 12855795 10 + TSS region transcription start site region 28376
Gm8935 3 12855836 to 12858633 2797 + pseudogene predicted pseudogene 8935
Gm8939 3 12892451 to 12893414 963 - pseudogene predicted gene 8939
Gm38317 3 12975359 to 12975701 342 + pseudogene predicted gene, 38317
Gm37813 3 13288197 to 13291891 3694 + unclassified gene predicted gene, 37813
Gm37197 3 13429558 to 13429958 400 + pseudogene predicted gene, 37197
Gm2464 3 13470439 to 13471829 1390 - lincRNA gene predicted gene 2464
Cpgi12985 3 13471360 to 13472187 827 CpG island CpG island 12985
Tssr28377 3 13471608 to 13471635 27 + TSS region transcription start site region 28377
Tssr28378 3 13471637 to 13471733 96 + TSS region transcription start site region 28378
Ralyl 3 13471655 to 14182287 710632 + protein coding gene RALY RNA binding protein-like
Tssr28379 3 13471747 to 13471758 11 + TSS region transcription start site region 28379
Tssr28380 3 13472023 to 13472030 7 + TSS region transcription start site region 28380
Tssr28381 3 13472450 to 13472469 19 + TSS region transcription start site region 28381
Tssr821 3 13472633 to 13472670 37 + TSS region transcription start site region 821
Cpgi12986 3 13472730 to 13473423 693 CpG island CpG island 12986
Tssr28382 3 13472871 to 13472927 56 + TSS region transcription start site region 28382
Tssr28383 3 13473205 to 13473218 13 + TSS region transcription start site region 28383
Tssr28384 3 13510011 to 13510016 5 + TSS region transcription start site region 28384
Tssr28385 3 13525946 to 13525947 1 + TSS region transcription start site region 28385
4930539N22Rik 3 13597139 to 13652865 55726 - lncRNA gene RIKEN cDNA 4930539N22 gene
Tssr28386 3 13610508 to 13610511 3 + TSS region transcription start site region 28386
Gm37164 3 13669509 to 13670145 636 - pseudogene predicted gene, 37164