Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108743180-108890502

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Aknad1	3	108739658 to 108782309	42651	+	protein coding gene	AKNA domain containing 1
Tssr31265	3	108744366 to 108744410	44	+	TSS region	transcription start site region 31265
D3Mit343.2	3	108768319 to 108768485	166		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 343.2
D3Mit39	3	108769194 to 108769421	227		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 39
Tssr31266	3	108774883 to 108774902	19	+	TSS region	transcription start site region 31266
Tssr31267	3	108774921 to 108774930	9	+	TSS region	transcription start site region 31267
Stxbp3	3	108793180 to 108840502	47322	-	protein coding gene	syntaxin binding protein 3
Tssr35171	3	108798051 to 108798055	4	-	TSS region	transcription start site region 35171
Tssr35172	3	108818367 to 108818384	17	-	TSS region	transcription start site region 35172
Tssr35173	3	108825889 to 108825897	8	-	TSS region	transcription start site region 35173
Cpgi13710	3	108839963 to 108840758	795		CpG island	CpG island 13710
Tssr35174	3	108840469 to 108840474	5	-	TSS region	transcription start site region 35174
Tssr35175	3	108840477 to 108840509	32	-	TSS region	transcription start site region 35175
Tssr35176	3	108840543 to 108840553	10	-	TSS region	transcription start site region 35176
Tssr35177	3	108845051 to 108845075	24	-	TSS region	transcription start site region 35177
Fndc7	3	108853678 to 108890008	36330	-	protein coding gene	fibronectin type III domain containing 7
Tssr35178	3	108855979 to 108855984	5	-	TSS region	transcription start site region 35178
Tssr31268	3	108856131 to 108856143	12	+	TSS region	transcription start site region 31268
Tssr35179	3	108858602 to 108858636	34	-	TSS region	transcription start site region 35179
Gm43097	3	108881823 to 108881973	150	+	pseudogene	predicted gene 43097
Tssr35180	3	108889799 to 108889808	9	-	TSS region	transcription start site region 35180
Tssr35181	3	108889827 to 108889830	3	-	TSS region	transcription start site region 35181
Tssr35182	3	108889867 to 108889894	27	-	TSS region	transcription start site region 35182
Tssr35183	3	108889912 to 108889917	5	-	TSS region	transcription start site region 35183
Tssr35184	3	108889990 to 108890031	41	-	TSS region	transcription start site region 35184