Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108743180-108890502

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aknad1 3 108739658 to 108782309 42651 + protein coding gene AKNA domain containing 1
Tssr31265 3 108744366 to 108744410 44 + TSS region transcription start site region 31265
D3Mit343.2 3 108768319 to 108768485 166 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 343.2
D3Mit39 3 108769194 to 108769421 227 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 39
Tssr31266 3 108774883 to 108774902 19 + TSS region transcription start site region 31266
Tssr31267 3 108774921 to 108774930 9 + TSS region transcription start site region 31267
Stxbp3 3 108793180 to 108840502 47322 - protein coding gene syntaxin binding protein 3
Tssr35171 3 108798051 to 108798055 4 - TSS region transcription start site region 35171
Tssr35172 3 108818367 to 108818384 17 - TSS region transcription start site region 35172
Tssr35173 3 108825889 to 108825897 8 - TSS region transcription start site region 35173
Cpgi13710 3 108839963 to 108840758 795 CpG island CpG island 13710
Tssr35174 3 108840469 to 108840474 5 - TSS region transcription start site region 35174
Tssr35175 3 108840477 to 108840509 32 - TSS region transcription start site region 35175
Tssr35176 3 108840543 to 108840553 10 - TSS region transcription start site region 35176
Tssr35177 3 108845051 to 108845075 24 - TSS region transcription start site region 35177
Fndc7 3 108853678 to 108890008 36330 - protein coding gene fibronectin type III domain containing 7
Tssr35178 3 108855979 to 108855984 5 - TSS region transcription start site region 35178
Tssr31268 3 108856131 to 108856143 12 + TSS region transcription start site region 31268
Tssr35179 3 108858602 to 108858636 34 - TSS region transcription start site region 35179
Gm43097 3 108881823 to 108881973 150 + pseudogene predicted gene 43097
Tssr35180 3 108889799 to 108889808 9 - TSS region transcription start site region 35180
Tssr35181 3 108889827 to 108889830 3 - TSS region transcription start site region 35181
Tssr35182 3 108889867 to 108889894 27 - TSS region transcription start site region 35182
Tssr35183 3 108889912 to 108889917 5 - TSS region transcription start site region 35183
Tssr35184 3 108889990 to 108890031 41 - TSS region transcription start site region 35184