Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108561279-108675719

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem167b 3 108556425 to 108562466 6041 - protein coding gene transmembrane protein 167B
Cpgi13705 3 108562123 to 108562693 570 CpG island CpG island 13705
Tssr35153 3 108562153 to 108562178 25 - TSS region transcription start site region 35153
Tssr35154 3 108562328 to 108562346 18 - TSS region transcription start site region 35154
Tssr35155 3 108562349 to 108562417 68 - TSS region transcription start site region 35155
Tssr35156 3 108562424 to 108562438 14 - TSS region transcription start site region 35156
Gm22860 3 108567310 to 108567383 73 - miRNA gene predicted gene, 22860
Cpgi13706 3 108571494 to 108571900 406 CpG island CpG island 13706
Taf13 3 108571699 to 108582068 10369 + protein coding gene TATA-box binding protein associated factor 13
Cpgi13707 3 108591042 to 108592249 1207 CpG island CpG island 13707
Wdr47 3 108591279 to 108645719 54440 + protein coding gene WD repeat domain 47
Tssr31257 3 108591322 to 108591414 92 + TSS region transcription start site region 31257
Tssr31258 3 108591467 to 108591489 22 + TSS region transcription start site region 31258
Tssr31259 3 108591495 to 108591517 22 + TSS region transcription start site region 31259
Tssr31260 3 108592434 to 108592438 4 + TSS region transcription start site region 31260
Gm12517 3 108602391 to 108602815 424 - pseudogene predicted gene 12517
Cpgi13708 3 108653753 to 108654428 675 CpG island CpG island 13708
Tssr35157 3 108653795 to 108653827 32 - TSS region transcription start site region 35157
Tssr31261 3 108653907 to 108653928 21 + TSS region transcription start site region 31261
Clcc1 3 108653913 to 108678840 24927 + protein coding gene chloride channel CLIC-like 1
Tssr31262 3 108653931 to 108653964 33 + TSS region transcription start site region 31262
Tssr31263 3 108653979 to 108653986 7 + TSS region transcription start site region 31263
Tssr31264 3 108655574 to 108655578 4 + TSS region transcription start site region 31264
D3Mit122 3 108660046 to 108660190 144 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 122