Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108521699-108632068

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
5330417C22Rik	3	108455694 to 108536536	80842	-	protein coding gene	RIKEN cDNA 5330417C22 gene
Tssr35150	3	108530059 to 108530062	3	-	TSS region	transcription start site region 35150
Gm37859	3	108532648 to 108534820	2172	-	unclassified gene	predicted gene, 37859
Tssr31252	3	108534126 to 108534133	7	+	TSS region	transcription start site region 31252
Tssr31253	3	108534140 to 108534147	7	+	TSS region	transcription start site region 31253
Cpgi13703	3	108536366 to 108536909	543		CpG island	CpG island 13703
Tssr35151	3	108536466 to 108536522	56	-	TSS region	transcription start site region 35151
Tssr31254	3	108537523 to 108537583	60	+	TSS region	transcription start site region 31254
1700013F07Rik	3	108537584 to 108544697	7113	+	protein coding gene	RIKEN cDNA 1700013F07 gene
Tssr31255	3	108537586 to 108537592	6	+	TSS region	transcription start site region 31255
Cpgi13704	3	108554100 to 108554871	771		CpG island	CpG island 13704
Scarna2	3	108554342 to 108554402	60	-	snoRNA gene	small Cajal body-specific RNA 2
Tssr31256	3	108554604 to 108554660	56	+	TSS region	transcription start site region 31256
Tssr35152	3	108554737 to 108554753	16	-	TSS region	transcription start site region 35152
Gm43435	3	108555467 to 108556904	1437	+	unclassified gene	predicted gene 43435
Tmem167b	3	108556425 to 108562466	6041	-	protein coding gene	transmembrane protein 167B
Cpgi13705	3	108562123 to 108562693	570		CpG island	CpG island 13705
Tssr35153	3	108562153 to 108562178	25	-	TSS region	transcription start site region 35153
Tssr35154	3	108562328 to 108562346	18	-	TSS region	transcription start site region 35154
Tssr35155	3	108562349 to 108562417	68	-	TSS region	transcription start site region 35155
Tssr35156	3	108562424 to 108562438	14	-	TSS region	transcription start site region 35156
Gm22860	3	108567310 to 108567383	73	-	miRNA gene	predicted gene, 22860
Cpgi13706	3	108571494 to 108571900	406		CpG island	CpG island 13706
Taf13	3	108571699 to 108582068	10369	+	protein coding gene	TATA-box binding protein associated factor 13
Cpgi13707	3	108591042 to 108592249	1207		CpG island	CpG island 13707
Wdr47	3	108591279 to 108645719	54440	+	protein coding gene	WD repeat domain 47
Tssr31257	3	108591322 to 108591414	92	+	TSS region	transcription start site region 31257
Tssr31258	3	108591467 to 108591489	22	+	TSS region	transcription start site region 31258
Tssr31259	3	108591495 to 108591517	22	+	TSS region	transcription start site region 31259
Tssr31260	3	108592434 to 108592438	4	+	TSS region	transcription start site region 31260
Gm12517	3	108602391 to 108602815	424	-	pseudogene	predicted gene 12517