Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108435694-108556536

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sars 3 108424865 to 108445209 20344 - protein coding gene seryl-aminoacyl-tRNA synthetase
Tssr35145 3 108439681 to 108439686 5 - TSS region transcription start site region 35145
Gm22942 3 108441330 to 108441453 123 + snoRNA gene predicted gene, 22942
Tssr31251 3 108444274 to 108444297 23 + TSS region transcription start site region 31251
Cpgi13702 3 108444704 to 108445378 674 CpG island CpG island 13702
Tssr35146 3 108445147 to 108445178 31 - TSS region transcription start site region 35146
Tssr35147 3 108445183 to 108445211 28 - TSS region transcription start site region 35147
D3Mit105 3 108450602 to 108450714 112 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 105
Gm43438 3 108451270 to 108451648 378 - pseudogene predicted gene 43438
5330417C22Rik 3 108455694 to 108536536 80842 - protein coding gene RIKEN cDNA 5330417C22 gene
Tssr35148 3 108475016 to 108475034 18 - TSS region transcription start site region 35148
Tssr35149 3 108475046 to 108475066 20 - TSS region transcription start site region 35149
Gm23336 3 108498118 to 108498240 122 + snRNA gene predicted gene, 23336
D3Mit56 3 108507844 to 108507986 142 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 56
Tssr35150 3 108530059 to 108530062 3 - TSS region transcription start site region 35150
Gm37859 3 108532648 to 108534820 2172 - unclassified gene predicted gene, 37859
Tssr31252 3 108534126 to 108534133 7 + TSS region transcription start site region 31252
Tssr31253 3 108534140 to 108534147 7 + TSS region transcription start site region 31253
Cpgi13703 3 108536366 to 108536909 543 CpG island CpG island 13703
Tssr35151 3 108536466 to 108536522 56 - TSS region transcription start site region 35151
Tssr31254 3 108537523 to 108537583 60 + TSS region transcription start site region 31254
1700013F07Rik 3 108537584 to 108544697 7113 + protein coding gene RIKEN cDNA 1700013F07 gene
Tssr31255 3 108537586 to 108537592 6 + TSS region transcription start site region 31255
Cpgi13704 3 108554100 to 108554871 771 CpG island CpG island 13704
Scarna2 3 108554342 to 108554402 60 - snoRNA gene small Cajal body-specific RNA 2
Tssr31256 3 108554604 to 108554660 56 + TSS region transcription start site region 31256
Tssr35152 3 108554737 to 108554753 16 - TSS region transcription start site region 35152
Gm43435 3 108555467 to 108556904 1437 + unclassified gene predicted gene 43435
Tmem167b 3 108556425 to 108562466 6041 - protein coding gene transmembrane protein 167B