Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108394704-108495378

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Celsr2	3	108390851 to 108415552	24701	-	protein coding gene	cadherin, EGF LAG seven-pass G-type receptor 2
Cpgi13700	3	108406828 to 108407366	538		CpG island	CpG island 13700
Cpgi13701	3	108414906 to 108416389	1483		CpG island	CpG island 13701
Tssr31250	3	108415979 to 108415989	10	+	TSS region	transcription start site region 31250
Tssr35143	3	108416011 to 108416050	39	-	TSS region	transcription start site region 35143
Tssr35144	3	108416052 to 108416066	14	-	TSS region	transcription start site region 35144
Sars	3	108424865 to 108445209	20344	-	protein coding gene	seryl-aminoacyl-tRNA synthetase
Tssr35145	3	108439681 to 108439686	5	-	TSS region	transcription start site region 35145
Gm22942	3	108441330 to 108441453	123	+	snoRNA gene	predicted gene, 22942
Tssr31251	3	108444274 to 108444297	23	+	TSS region	transcription start site region 31251
Cpgi13702	3	108444704 to 108445378	674		CpG island	CpG island 13702
Tssr35146	3	108445147 to 108445178	31	-	TSS region	transcription start site region 35146
Tssr35147	3	108445183 to 108445211	28	-	TSS region	transcription start site region 35147
D3Mit105	3	108450602 to 108450714	112		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 105
Gm43438	3	108451270 to 108451648	378	-	pseudogene	predicted gene 43438
5330417C22Rik	3	108455694 to 108536536	80842	-	protein coding gene	RIKEN cDNA 5330417C22 gene
Tssr35148	3	108475016 to 108475034	18	-	TSS region	transcription start site region 35148
Tssr35149	3	108475046 to 108475066	20	-	TSS region	transcription start site region 35149