Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108309913-108419943

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sort1 3 108284082 to 108361511 77429 + protein coding gene sortilin 1
Tssr31242 3 108312905 to 108312930 25 + TSS region transcription start site region 31242
Gm12525 3 108361551 to 108362256 705 + lincRNA gene predicted gene 12525
Tssr31243 3 108364882 to 108364911 29 + TSS region transcription start site region 31243
Mybphl 3 108364911 to 108380057 15146 + protein coding gene myosin binding protein H-like
Tssr31244 3 108364913 to 108364943 30 + TSS region transcription start site region 31244
Tssr31245 3 108364976 to 108364988 12 + TSS region transcription start site region 31245
Gm12522 3 108379277 to 108383741 4464 - lncRNA gene predicted gene 12522
Tssr35142 3 108382500 to 108382541 41 - TSS region transcription start site region 35142
Cpgi13699 3 108383466 to 108384136 670 CpG island CpG island 13699
Tssr31246 3 108383829 to 108383886 57 + TSS region transcription start site region 31246
Psrc1 3 108383839 to 108388231 4392 + protein coding gene proline/serine-rich coiled-coil 1
Tssr31247 3 108383887 to 108383898 11 + TSS region transcription start site region 31247
Tssr31248 3 108383983 to 108384001 18 + TSS region transcription start site region 31248
Tssr31249 3 108384005 to 108384017 12 + TSS region transcription start site region 31249
Celsr2 3 108390851 to 108415552 24701 - protein coding gene cadherin, EGF LAG seven-pass G-type receptor 2
Cpgi13700 3 108406828 to 108407366 538 CpG island CpG island 13700
Cpgi13701 3 108414906 to 108416389 1483 CpG island CpG island 13701
Tssr31250 3 108415979 to 108415989 10 + TSS region transcription start site region 31250
Tssr35143 3 108416011 to 108416050 39 - TSS region transcription start site region 35143
Tssr35144 3 108416052 to 108416066 14 - TSS region transcription start site region 35144