Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108189869-108231233

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Amigo1 3 108186335 to 108192286 5951 + protein coding gene adhesion molecule with Ig like domain 1
Cyb561d1 3 108195687 to 108201212 5525 - protein coding gene cytochrome b-561 domain containing 1
Tssr1019 3 108199916 to 108199926 10 + TSS region transcription start site region 1019
Tssr35130 3 108200415 to 108200445 30 - TSS region transcription start site region 35130
Cpgi13693 3 108200459 to 108201077 618 CpG island CpG island 13693
Tssr31237 3 108200599 to 108200629 30 + TSS region transcription start site region 31237
Tssr35131 3 108200807 to 108200858 51 - TSS region transcription start site region 35131
Atxn7l2 3 108202222 to 108210527 8305 - protein coding gene ataxin 7-like 2
Cpgi13694 3 108209869 to 108211233 1364 CpG island CpG island 13694
Tssr35132 3 108210438 to 108210502 64 - TSS region transcription start site region 35132
Sypl2 3 108211472 to 108226648 15176 - protein coding gene synaptophysin-like 2
Tssr35133 3 108213649 to 108213657 8 - TSS region transcription start site region 35133
Tssr35134 3 108217686 to 108217717 31 - TSS region transcription start site region 35134
Cpgi13695 3 108225837 to 108226918 1081 CpG island CpG island 13695
Tssr35135 3 108226573 to 108226589 16 - TSS region transcription start site region 35135
Tssr35136 3 108226598 to 108226683 85 - TSS region transcription start site region 35136
Gm40123 3 108226808 to 108239470 12662 + lincRNA gene predicted gene, 40123