Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108134916-108264926

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gnai3 3 108107280 to 108146146 38866 - protein coding gene guanine nucleotide binding protein (G protein), alpha inhibiting 3
Cpgi13689 3 108134873 to 108135025 152 CpG island CpG island 13689
Cpgi13690 3 108145655 to 108146396 741 CpG island CpG island 13690
Tssr35128 3 108146080 to 108146150 70 - TSS region transcription start site region 35128
Tssr1018 3 108146175 to 108146196 21 + TSS region transcription start site region 1018
Tssr31234 3 108146200 to 108146223 23 + TSS region transcription start site region 31234
Gpr61 3 108148321 to 108154882 6561 - protein coding gene G protein-coupled receptor 61
Cpgi13691 3 108150456 to 108150914 458 CpG island CpG island 13691
Tssr35129 3 108154871 to 108154908 37 - TSS region transcription start site region 35129
Gm12524 3 108166443 to 108185907 19464 + lincRNA gene predicted gene 12524
Gm40122 3 108172661 to 108175370 2709 - lncRNA gene predicted gene, 40122
Cpgi13692 3 108185990 to 108187301 1311 CpG island CpG island 13692
Tssr31235 3 108186332 to 108186407 75 + TSS region transcription start site region 31235
Amigo1 3 108186335 to 108192286 5951 + protein coding gene adhesion molecule with Ig like domain 1
Tssr31236 3 108186410 to 108186424 14 + TSS region transcription start site region 31236
Cyb561d1 3 108195687 to 108201212 5525 - protein coding gene cytochrome b-561 domain containing 1
Tssr1019 3 108199916 to 108199926 10 + TSS region transcription start site region 1019
Tssr35130 3 108200415 to 108200445 30 - TSS region transcription start site region 35130
Cpgi13693 3 108200459 to 108201077 618 CpG island CpG island 13693
Tssr31237 3 108200599 to 108200629 30 + TSS region transcription start site region 31237
Tssr35131 3 108200807 to 108200858 51 - TSS region transcription start site region 35131
Atxn7l2 3 108202222 to 108210527 8305 - protein coding gene ataxin 7-like 2
Cpgi13694 3 108209869 to 108211233 1364 CpG island CpG island 13694
Tssr35132 3 108210438 to 108210502 64 - TSS region transcription start site region 35132
Sypl2 3 108211472 to 108226648 15176 - protein coding gene synaptophysin-like 2
Tssr35133 3 108213649 to 108213657 8 - TSS region transcription start site region 35133
Tssr35134 3 108217686 to 108217717 31 - TSS region transcription start site region 35134
Cpgi13695 3 108225837 to 108226918 1081 CpG island CpG island 13695
Tssr35135 3 108226573 to 108226589 16 - TSS region transcription start site region 35135
Tssr35136 3 108226598 to 108226683 85 - TSS region transcription start site region 35136
Gm40123 3 108226808 to 108239470 12662 + lincRNA gene predicted gene, 40123
Gm12501 3 108239383 to 108239911 528 - pseudogene predicted gene 12501
Cpgi13696 3 108239553 to 108240192 639 CpG island CpG island 13696
1700010K24Rik 3 108248909 to 108256985 8076 - antisense lncRNA gene RIKEN cDNA 1700010K24 gene
Cpgi13697 3 108256681 to 108257643 962 CpG island CpG island 13697
Tssr35137 3 108256804 to 108256841 37 - TSS region transcription start site region 35137
Psma5 3 108256926 to 108279952 23026 + protein coding gene proteasome (prosome, macropain) subunit, alpha type 5
Tssr35138 3 108256980 to 108257030 50 - TSS region transcription start site region 35138
Tssr1020 3 108257138 to 108257141 3 + TSS region transcription start site region 1020
Tssr31238 3 108257160 to 108257171 11 + TSS region transcription start site region 31238